| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2159 |
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| Symbol | |
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| ID | 7174081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2692492 |
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| End bp | 2694081 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643540679 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002436570 |
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| Protein GI | 218887249 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTG GCCTGTTGGC AACCGGCCTG ATGGTAACCG TCCTTGCGCT GTCCGGCTGC
GCCGTGGGGC CGGACTACGA CCGCCCCGCC CCGCCCGCCG CGCCCACGGA ATGGAGCGCG
GCCAAGACCC GCCCCGAAAT TTCCGGTGAT GTTTCCGGCA GCGGGGCCCC TGCCGAGTCT
GCCGGTTCGG TGGCGCCCCG CGCCGCCGTA AGCGCCGCCA CCCCGGACGG CCAGTGGTGG
GAACGCATGG GCGACCCGCA GCTGTCGGAA CTGGTGGCCA TGGCCGTGGG GCACAACAAC
GACGCCCTCA TCGCCGCCGC CAACCTGCGC GAGGCCCGCG CCGTGGTGGG CGTGGCCCGT
GGCGCGCTGC TGCCGGCAGC GGCGGCGGGC GGCAGCTTCG AGCGCAGCCG GGTAAGCACC
AACACCCTTA CCGGGCAATC GCTGGAAATG GCCCGCATGC CCATTGAAAG CGACCTGTAC
CAGGCCGGGT TCGACGCCCG GTGGGAAATA GACATCTTCG GCGGTGCCCG GCGCGGCGTG
GAAGCGGCCC GCGCCCGTCA GCAGGCGGCG GAGGCGGGGT TGTCCGACGT GCTGCTTTCG
GTGGCGGCGG AAACGGCCCG CGCCTACGCG GAGCTGCGCG GCGCGCAGGC CCGGCTGGAC
GTGGCCGAAC GCAACGCCGA GGCCCAGCGG CGCACCCTGG AACTGGTGCG GCTGCGCCGC
GACGTGGGCG TGGCCAGCGA CATGAACGTG TTGCAGGCCG AGGCCCAGTT GCAGCGCACC
GAGGCCCTGG TGCCCCCGCT GCGCGCCGCA ACCGACGCCG CCATCCACCG GCTGGGCGTG
CTGTGCGGCC TGCCCCCGGC GGCACTGCGC GACCGGCTGG CCCCGCGCGC GCCCCTGCCC
GCCGTGCCCG ACCTGGTGCC CGTGGGTCTG CCTTCGGACC TTCTGCTGCG CCGTCCGGAC
ATCCGCCGGG TGGAGCATGA ACTGCACGCG GCCACGGCGG ACATAGGCCA GCGCGAGGCG
GACCTGTTTC CCAAGTTCTC GCTCACCGGA TCGTACGGCC TGAACAGCAT TCATTTTTCC
GACCTGTTCC GCGACGACAG CCGCGCCTGG ACCATCATGC CCGGCGTGCG CTGGGCCATC
TTCGAGGGGG GGCGCACCCG CGCCGCCGTG GCCGCGTTGG AGGCCCGGCG CGAGGCCACC
CTGGAGCGCT GGCGCAAGAC CGTGCTGGTG GCCTTTGAAG AGGTGGAAAC CTCGCTGGCC
CGCTATGCCG AAGCGTTCGT GGAGCGCGAG CGGCTGTCCC GCTCGCTGGA GGCGCAGGCC
GAGGCCACCC GGCTGGCCAA GGTGCGCTAC ACGGAAGGCG TGGACGACCT GCTGACCGTG
CTGGACGCAG AGCGCCGCCA GCTGGAAGTG GAAGAGGCAC TGGCCCGCAG CCGTTCCGGC
GTGCTGCTGC ATCTGGTGTC GCTGTACAAG GCCCTGGGGG GCGGCTGGCC CGAGGGAACT
GCCATGGCCG GGGCCGATGC GGCGCCGAAT CCGGCGGCCC CTTCGGCCCC TTCACAGGGT
GGAGCCGCCG GCGCGGCCTC GCCGCAGTAG
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| Protein sequence | MPSGLLATGL MVTVLALSGC AVGPDYDRPA PPAAPTEWSA AKTRPEISGD VSGSGAPAES
AGSVAPRAAV SAATPDGQWW ERMGDPQLSE LVAMAVGHNN DALIAAANLR EARAVVGVAR
GALLPAAAAG GSFERSRVST NTLTGQSLEM ARMPIESDLY QAGFDARWEI DIFGGARRGV
EAARARQQAA EAGLSDVLLS VAAETARAYA ELRGAQARLD VAERNAEAQR RTLELVRLRR
DVGVASDMNV LQAEAQLQRT EALVPPLRAA TDAAIHRLGV LCGLPPAALR DRLAPRAPLP
AVPDLVPVGL PSDLLLRRPD IRRVEHELHA ATADIGQREA DLFPKFSLTG SYGLNSIHFS
DLFRDDSRAW TIMPGVRWAI FEGGRTRAAV AALEARREAT LERWRKTVLV AFEEVETSLA
RYAEAFVERE RLSRSLEAQA EATRLAKVRY TEGVDDLLTV LDAERRQLEV EEALARSRSG
VLLHLVSLYK ALGGGWPEGT AMAGADAAPN PAAPSAPSQG GAAGAASPQ
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