Gene DvMF_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2125 
Symbol 
ID7174045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2644383 
End bp2645978 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content66% 
IMG OID643540643 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002436536 
Protein GI218887215 
COG category[K] Transcription
[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT TACGCTTTGA AGAATTGTCC CTTTCCAAGG AAATCCTGAA GGCCATCGAA 
GAGATGGGCT TCGAAGAAAC CTCGCCCATC CAGGCGCTGG CCATCCCCCA CATCCTCGAA
GGCCGCGACG TCATCGGCCA GGCCCAGACC GGCACCGGCA AGACCGCCGC CTTCGGCATT
CCCCTGCTGG AACGCATCGA CCCGCGCGAA AAGGACATCC AGGGCATCAT CCTGTGCCCC
ACGCGCGAAC TGGCCATCCA GGTGGCGGAA GAACTTACCC AACTGGCCTC GCGCAAGCGC
GGCCTGTACG TGCTGCCCGT GTACGGCGGC CAGCCCATCG ACCGCCAGTT CAAGGCCCTG
CGCCGCGGCG CGCAGGTGGT GGTGGGCACG CCGGGCCGCG TCATGGACCA CATGGAGCGC
GGCACCATCA ACCTTTCCAC GGTGCGCATG GCCGTGCTGG ATGAAGCCGA CGAAATGCTC
GACATGGGCT TTCGCGACGA CATCGAGCAC ATCCTGGGCC AGGTGCCGGG CGAGGCGCAG
ACGGTGTTCT TCTCGGCCAC CATGCCCCCG GCCATCCTCG ACATGGCCCA GCGCTTCCTG
AAGACGCCCG AATTCCTCAA GGTGACCCAG AAGCAGGTCA CCGTGCCCAG CATCGAACAG
ATCTACTACG AGGTGCGGCC CTTCCAGAAG CTGGAGGCCC TGTGCCGCGT GCTGGACCTG
TACAACCCCA AGCGCGCCAT CGTGTTCTGC TCGACCAAGC GCGGCGTGGA TGAACTGACC
CAGCACCTGC AGGGGCGCGG CTACCAGGCC GACGGCCTGC ACGGCAACCT CAACCAGTCG
CAGCGCGACC GGGTGATGGC GCGCTTCCGC AGCAACGGCA TCGAAATCCT GGTGGCCACC
GACGTGGCCG CGCGCGGCAT CGACGTGGAC GACGTGGAAG CCGTGGTCAA CTACGACATC
CCCAACGCCG TCGAACACTA CGTGCACCGC ATCGGTCGCA CGGGCCGCGC CGGGCGTTCG
GGCCGGGCGT TCACCTTTGT TTCCGGGCGC GACTTCTACA AGCTGCGCGA CATCAAGAAG
TTCACCAAGG CGCACATCGT GCAGCACCAG GTGCCCACGT CCAGCGACGT GGCCACGGTG
AAGACCAACC AGCTGCTGGC CGAAGTGCGC CGCCACATCG AGGCGGGCGA ACTGGAAAAG
TACACCGACA TCGTGGAATC GTTCCTGGAC GAGGACGTGA CCACCGTGGA CATGGCCGCA
GCGCTGCTGA AGCTGCTGAT GCGCCGCGAA CTGGGCGACG CCGTGCCCGG CGGTGAAAAG
ACCCCCGCAG GCACCGGCGC CGAACCCGGC ATGGTGCGCC TGTTCCTGAA CGTGGGCCGC
AAGATGCGCG TCACCGCGCG CGACATCGTG GGTGCCATCG CGGGCGAAAC CGGCATCCCC
GGACGCATGA TCGGGGCCAT CGACATCCGC GACCGCGTGT CGTTCGTGGA AGTGCCTGCC
GACTACGCGC AGGAAGTCAT CTCGGTGATG AACGGCAACC AGATCCGGGG CTTCCGCCTT
GGGGTGGAGC CGGCGACCCC GCGCGACCGG GAATAG
 
Protein sequence
METLRFEELS LSKEILKAIE EMGFEETSPI QALAIPHILE GRDVIGQAQT GTGKTAAFGI 
PLLERIDPRE KDIQGIILCP TRELAIQVAE ELTQLASRKR GLYVLPVYGG QPIDRQFKAL
RRGAQVVVGT PGRVMDHMER GTINLSTVRM AVLDEADEML DMGFRDDIEH ILGQVPGEAQ
TVFFSATMPP AILDMAQRFL KTPEFLKVTQ KQVTVPSIEQ IYYEVRPFQK LEALCRVLDL
YNPKRAIVFC STKRGVDELT QHLQGRGYQA DGLHGNLNQS QRDRVMARFR SNGIEILVAT
DVAARGIDVD DVEAVVNYDI PNAVEHYVHR IGRTGRAGRS GRAFTFVSGR DFYKLRDIKK
FTKAHIVQHQ VPTSSDVATV KTNQLLAEVR RHIEAGELEK YTDIVESFLD EDVTTVDMAA
ALLKLLMRRE LGDAVPGGEK TPAGTGAEPG MVRLFLNVGR KMRVTARDIV GAIAGETGIP
GRMIGAIDIR DRVSFVEVPA DYAQEVISVM NGNQIRGFRL GVEPATPRDR E