Gene DvMF_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2056 
Symbol 
ID7173975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2548364 
End bp2549155 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID643540573 
Productthiamine pyrophosphate protein domain protein TPP-binding 
Protein accessionYP_002436467 
Protein GI218887146 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTG ACGAAAGACT GGCGCTCGCC GACGACGAGC AGATGGCCTT CGAGGTTCCC 
GACGTGCTGG TGGACCGCGC CACCCACTAC TGCCCCGGCT GCCACCACGG CATCGCCCAC
CGCCTGGTGG CCGAAGTGCT GGAGGAAATG GGCGTGGTGG ACGACACCAT CTGCGTGGCC
TCCATCGGCT GTTCGGTGTT CATCTACAAC TATCTGGCCG TGGACTCGGT AGAGGCCCCG
CACGGGCGCG CCCCTGCCGT GGCCACCGGC GTCAAGCGCG GGCGCACGGA CAAGATCGTG
TTCACCTATC AGGGTGACGG CGACCTGGCG TCCATCGGGC TGGCCGAGGT GATGCACGCC
GCCAACCGTG GCGAGCGCAT CACCATCGTG TTCGTGAACA ACACCGTGTA CGGCATGACC
GGCGGCCAGA TGGCCCCCAC CACCCTCATC GGGCAGAAGA CCACCACCTG CCCCGGTGGC
CGCTGCCGCG ACCGCGAGGG CATGCCCATC CGCATGGCAG AGATCATCGC GGGCCTTGGC
GGGGTGGCCT ATTCCGCCCG CGCCTCGCTG GACAGCGTCA AGAACATCCG CGCCGCCAAG
AAGGCCGTGC GCAAGGCCTT CGACGTGCAG CAACAGGGCC TGGGCTTCGG CTTCGTGGAG
CTGCTGTCCG GCTGCCCCAC CAACTGGCGC ATGGACGCGG TGAAGGCCAA TACCCGCATC
CGCGAAGAGA TGATCCCCTA CTTTCCGCTG GGGGTGTACA AGGACGTGAC CGAAGGCGAG
GGGGTGTGCT GA
 
Protein sequence
MQADERLALA DDEQMAFEVP DVLVDRATHY CPGCHHGIAH RLVAEVLEEM GVVDDTICVA 
SIGCSVFIYN YLAVDSVEAP HGRAPAVATG VKRGRTDKIV FTYQGDGDLA SIGLAEVMHA
ANRGERITIV FVNNTVYGMT GGQMAPTTLI GQKTTTCPGG RCRDREGMPI RMAEIIAGLG
GVAYSARASL DSVKNIRAAK KAVRKAFDVQ QQGLGFGFVE LLSGCPTNWR MDAVKANTRI
REEMIPYFPL GVYKDVTEGE GVC