Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2056 |
Symbol | |
ID | 7173975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2548364 |
End bp | 2549155 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643540573 |
Product | thiamine pyrophosphate protein domain protein TPP-binding |
Protein accession | YP_002436467 |
Protein GI | 218887146 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCTG ACGAAAGACT GGCGCTCGCC GACGACGAGC AGATGGCCTT CGAGGTTCCC GACGTGCTGG TGGACCGCGC CACCCACTAC TGCCCCGGCT GCCACCACGG CATCGCCCAC CGCCTGGTGG CCGAAGTGCT GGAGGAAATG GGCGTGGTGG ACGACACCAT CTGCGTGGCC TCCATCGGCT GTTCGGTGTT CATCTACAAC TATCTGGCCG TGGACTCGGT AGAGGCCCCG CACGGGCGCG CCCCTGCCGT GGCCACCGGC GTCAAGCGCG GGCGCACGGA CAAGATCGTG TTCACCTATC AGGGTGACGG CGACCTGGCG TCCATCGGGC TGGCCGAGGT GATGCACGCC GCCAACCGTG GCGAGCGCAT CACCATCGTG TTCGTGAACA ACACCGTGTA CGGCATGACC GGCGGCCAGA TGGCCCCCAC CACCCTCATC GGGCAGAAGA CCACCACCTG CCCCGGTGGC CGCTGCCGCG ACCGCGAGGG CATGCCCATC CGCATGGCAG AGATCATCGC GGGCCTTGGC GGGGTGGCCT ATTCCGCCCG CGCCTCGCTG GACAGCGTCA AGAACATCCG CGCCGCCAAG AAGGCCGTGC GCAAGGCCTT CGACGTGCAG CAACAGGGCC TGGGCTTCGG CTTCGTGGAG CTGCTGTCCG GCTGCCCCAC CAACTGGCGC ATGGACGCGG TGAAGGCCAA TACCCGCATC CGCGAAGAGA TGATCCCCTA CTTTCCGCTG GGGGTGTACA AGGACGTGAC CGAAGGCGAG GGGGTGTGCT GA
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Protein sequence | MQADERLALA DDEQMAFEVP DVLVDRATHY CPGCHHGIAH RLVAEVLEEM GVVDDTICVA SIGCSVFIYN YLAVDSVEAP HGRAPAVATG VKRGRTDKIV FTYQGDGDLA SIGLAEVMHA ANRGERITIV FVNNTVYGMT GGQMAPTTLI GQKTTTCPGG RCRDREGMPI RMAEIIAGLG GVAYSARASL DSVKNIRAAK KAVRKAFDVQ QQGLGFGFVE LLSGCPTNWR MDAVKANTRI REEMIPYFPL GVYKDVTEGE GVC
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