Gene DvMF_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2040 
Symbol 
ID7173959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2530606 
End bp2531715 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content69% 
IMG OID643540557 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002436451 
Protein GI218887130 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC AGGACGCAGT GCACGCTGAT GGCGCCATGC CAGACTGCAA CGGCAATACG 
GACGCCGCAC GGGTGGTGAC GGAACCCGCC GCCCCGCGCG CCCCCCTGCG CGTGGTGTTC
ATGGGCACGC CCGGCTTTGC CGCGGTGATC ATGCGCCACC TGCTGGAATG GGACGGCTGC
GAGGTGATCG CCGCGTACAC CCAGCCGGAC CGCCCCTGCG GGCGCGGCCA GCAGTGCAGG
CCGCCGGAAG TGAAGCTGCT GGCCATGGAA CACGGCGTGC CGGTGTACCA GCCCCTGAAT
TTCAAGACCG AGGAAGCCGT TGCGGAATTG CGTTCCCTGC GGCCCGACGT GCTGGTGGTA
GCCGCCTACG GGCTTATCCT GCCGCAATCG GTGCTGGACA TCCCGCGCCT TGGCCCCGTC
AACGTGCATG CCTCGCTGCT GCCGCGCCTG CGCGGCGCCG CGCCCATCCA GCGCGCCGTC
ATGGCCGGTG ACGCCGTGAC CGGGGTAACC ATCATGCGCA TGGAAGCCAG CCTGGATACC
GGCCCCATGC TGCTGCAAAA GGCCATGGGC ATCGACATCA ACGACACCGC TGGCGACCTG
CACGACCAGC TGGCCGAGCT CGGCGGCAGG CTGCTGACCG TGGCCTTGGG CAAGCTGGCC
GACGGCACCG CCGTTGCCAT TCCGCAGGAT CACGACCGGG CCACCTACGC CGCCAAGCTG
ACCAAGGCCG ACGGCCTCAT CGACTGGAAC CGCCCTGCCG CGCAGGTGCA CGCGCACATT
CGCGGGGTTA CCCCGTGGCC CGGCGCGTAC TGCACCATTC AAAGGCAGAG CCAGGGGCTC
CAGGGCGGTA CGGTCCAGAA GGAACTGCGC GTGTCCCTAG GCCCCGGTCG CTTCGGCCCG
TTGCGGTCGG AGGCCCCGGA ATACGATGGC GCCGCTCCCG GTACGATAGT CGGGCTGGTG
GACGAGCAAC TGGCCATCGC CTGCGCCGAC CGGCTGTACC TTGTGGATTC CATCCGCCCG
GCGGACCGCA AGCCCATGGA TGCCCGCGCC TTTCTGTGCG GCTACCTGAA CGCCTGCGAG
TGCGACGGCG GCCTAGCCGT GTGCGTGTAG
 
Protein sequence
MTGQDAVHAD GAMPDCNGNT DAARVVTEPA APRAPLRVVF MGTPGFAAVI MRHLLEWDGC 
EVIAAYTQPD RPCGRGQQCR PPEVKLLAME HGVPVYQPLN FKTEEAVAEL RSLRPDVLVV
AAYGLILPQS VLDIPRLGPV NVHASLLPRL RGAAPIQRAV MAGDAVTGVT IMRMEASLDT
GPMLLQKAMG IDINDTAGDL HDQLAELGGR LLTVALGKLA DGTAVAIPQD HDRATYAAKL
TKADGLIDWN RPAAQVHAHI RGVTPWPGAY CTIQRQSQGL QGGTVQKELR VSLGPGRFGP
LRSEAPEYDG AAPGTIVGLV DEQLAIACAD RLYLVDSIRP ADRKPMDARA FLCGYLNACE
CDGGLAVCV