Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2038 |
Symbol | aspS |
ID | 7173957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2528054 |
End bp | 2529898 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643540555 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002436449 |
Protein GI | 218887128 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC AGAAACTTGA CGTCCAACAG GAACACCAGC AGTACATCGA ACCCCTGGGC GACTGGGTGC GCAGCCACGA TTGCGCCACC CTTACCGCCG CCGACACCGG GGCCGAAGTC TGCCTGATGG GCTGGGTACA GTACCGCCGC GACCACGGCG GCCTCATTTT CGTGGACCTG CGCGACCGCC AGGGCCTTAC CCAGATCGTG TTCAGCCCAG ACGTCAATCC CGCCGCGCAT GAGCGCGCGC ACATCATCCG CTCTGAATAC GTGCTGGCCA TTCGCGGCAC CGTGCGGCCC CGGCCCGAGG GCATGACCAA CCCCGGCATG AAGACCGGCG AGATCGAGGT GTACGTTTCC GAATGGAAGC TGCTGAACAC CTCCAAGACG CCCGCCTTCG TCATCGAGGA CCGCACCGAG GCCAGCGAGA ACCTGCGCCT GCAGTACCGC TACCTCGACC TGCGCCGCCC GCGCATGGCC AACAACTTCA TCGTGCGCCA CAAGGCCGCG CAGGCCACCC GCCGCTACCT GGACGAGCTG GGCTTTCTCG AGATCGAGAC GCCCTACCTC ACCAAGTCCA CGCCGGAAGG CGCGCGCGAC TTTCTGGTGC CCAGCCGCCT GAACCAGGGC CAGTTCTACG CCCTGCCGCA GTCGCCCCAG CTGTTCAAAC AATTGCTCAT GATGTCGGGC ATGGAGCGCT ACTACCAGAT CGTGCGCTGC TTCCGCGACG AGGACATGCG CGCCGACCGC CAGCTGGAGT TCACCCAGAT CGATATCGAG ATGAGCTTCG TGGACGAGGA ACAGGTGATG GCCATGGCCG AAGGCCTGAT GGCCCGCGTG TTCCGCGACG CGCTGGACCG CGAGATCGCC ACCCCCTTTC CGCGCATGAG CTATGACGAC GCCATGGCCC GCTACGGCGT GGACAAGCCG GACACCCGCT TCGGGCTGGA GCTGCAGGAC GTCACGCACA TCGTGCGCGG CTCCAACTTC AAGCTGTTCG CCACGGCGGA GCTGGTCAAG GCCATGCGCG TGCCCGGCGG CGAAACCATG ACCCGCAAGG AGATCGACGA ATTCACCGAG TTCGTGAAGA TCTACGGCGC GCAGGGCCTG GCCTGGATCA AGATCCGCCC CGACGAATGG CAGTCGCCCA TCGCCAAGTT CCTGTCCGAC GAGGAACGCG CCGGGCTGAA GGACGCGCTG GGCCTTGAAA CGGGCGACAT CGTGTTCTTC CAGGCGGGCG CGCCGGGCAT GGTCAACGCG GCGCTGGGCA ACCTGCGCGT GCGCCTTGGC GAGCACCTGG GCCTCATTGA CGAGAACGCC TTCAACTTCC TGTGGGTGAC CGACTTCCCG CTGTTCGAAT ACGACGAGGA AGAAAAGCGC TACGTGGCCT GCCACCATCC GTTCACCTCG CCCAAGGACG GCCACATGGA CGTCATGGTC GAGAACCCGG CGGCGGCCCG CGCCCGCGCC TACGACATGG TGCTGAACGG CTACGAGCTG GGCGGCGGCT CCATCCGCAA CCACACGGCG GAAAAGCAGC GCCGTATGTT CGCGGCACTC GGCTTCTCGC CGGAAGAAGC GGAAGCGCAG TTCGGCTTCC TGACCCAGGC GCTGGAAATG GGCGCCCCGC CGCACGGCGG CATCGCCTTC GGCATGGACC GTCTGGCCAT GCTGCTGACC GGCTCGTCGT CCATCCGCGA TGTCATCGCC TTCCCCAAGA CCCAGAAGGC CACCTGCCTG CTCACCCAGG CCCCGGACAG CGTATCCGCC CGCCAACTGC GCGACCTGGG CCTGCGCCTG CGCGAAACGG GCAAGGACGG CGCACCCAAC GCTCCGCAGG GCTAG
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Protein sequence | MSDQKLDVQQ EHQQYIEPLG DWVRSHDCAT LTAADTGAEV CLMGWVQYRR DHGGLIFVDL RDRQGLTQIV FSPDVNPAAH ERAHIIRSEY VLAIRGTVRP RPEGMTNPGM KTGEIEVYVS EWKLLNTSKT PAFVIEDRTE ASENLRLQYR YLDLRRPRMA NNFIVRHKAA QATRRYLDEL GFLEIETPYL TKSTPEGARD FLVPSRLNQG QFYALPQSPQ LFKQLLMMSG MERYYQIVRC FRDEDMRADR QLEFTQIDIE MSFVDEEQVM AMAEGLMARV FRDALDREIA TPFPRMSYDD AMARYGVDKP DTRFGLELQD VTHIVRGSNF KLFATAELVK AMRVPGGETM TRKEIDEFTE FVKIYGAQGL AWIKIRPDEW QSPIAKFLSD EERAGLKDAL GLETGDIVFF QAGAPGMVNA ALGNLRVRLG EHLGLIDENA FNFLWVTDFP LFEYDEEEKR YVACHHPFTS PKDGHMDVMV ENPAAARARA YDMVLNGYEL GGGSIRNHTA EKQRRMFAAL GFSPEEAEAQ FGFLTQALEM GAPPHGGIAF GMDRLAMLLT GSSSIRDVIA FPKTQKATCL LTQAPDSVSA RQLRDLGLRL RETGKDGAPN APQG
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