Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2028 |
Symbol | |
ID | 7173947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2513208 |
End bp | 2513909 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643540545 |
Product | NLP/P60 protein |
Protein accession | YP_002436439 |
Protein GI | 218887118 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCG CACACTCCGC CGACATGAAC CGGCGCGCGC ACCCTGCCAG CATTGCCACC GCCGCTCCGC ACCCCGCCGG AATGCGCGGC GCGCCGCATT GCGCCCATCC GCACGGCCAC GGCCCCGCTG GCCAACTGAC GGACAGCCGG GCCTTCGCCC GCGCCACCGC ACGCTGGACC GCGCTGACTG CCCTGCTGCT GTCCGTTGTG GCACTTGCGG GCTGCGCGGG CAAGCAGCAG ATCGCCATCC CCCAGGAAAC ACCGCAGCAG GTCCGCCAGC AGGCCCCTGC CGCGCCGTCG CAGGCCTTGG TGCGCACCGC TCGCTCCGCC TTGGGCGTGC CCTACCGCAA CGGTGGACGC ACCCCGACGG AAGGGTTCGA CTGTTCGGGC TTCGTGTGGT GGACGTTCTA CCAACACGGG GTGAACCTGC CGCGCACCAC GGAAGAACAG GCCGCCTGCG GCAGCCCGGT GCCCCCCGGC CACGAACTGC GTCCCGCCGA CATCATCGTG TTCCGCACCG GGTCCGGCCC GCTGGGCCTG CACACGGCCA TCTACACCGG GGGCGGGCAG TTCGTGCACA GCCCCAAGCC CGGCGGCACG GTGCGCGAGG AAAGCCTGAC CGTACACTAC TGGCAGCGCG CCTTCATTGC CGCGCGGCGC ATCCTGCGCC CGGCGGACCA GCCAGCCGCC AGCCAGCCCT GA
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Protein sequence | MRPAHSADMN RRAHPASIAT AAPHPAGMRG APHCAHPHGH GPAGQLTDSR AFARATARWT ALTALLLSVV ALAGCAGKQQ IAIPQETPQQ VRQQAPAAPS QALVRTARSA LGVPYRNGGR TPTEGFDCSG FVWWTFYQHG VNLPRTTEEQ AACGSPVPPG HELRPADIIV FRTGSGPLGL HTAIYTGGGQ FVHSPKPGGT VREESLTVHY WQRAFIAARR ILRPADQPAA SQP
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