| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1960 |
|---|
| Symbol | potA |
|---|
| ID | 7173878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2421611 |
|---|
| End bp | 2422810 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643540476 |
|---|
| Product | putrescine/spermidine ABC transporter ATPase protein |
|---|
| Protein accession | YP_002436371 |
|---|
| Protein GI | 218887050 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC AGGATCACAT CATCGAGTTG CGCGGCGTCA CCAAGACGTT CGAAGACACC
GTGGCGCTCG ATTCCATAGA CCTCACCATC CGCAACGGCG AGTTCCTGAC CCTGCTGGGG
CCGTCGGGCT GCGGCAAGAC CACCATCCTG CGCCTGGTTT CGGGCTTCGA GCAGCCCACG
TCGGGCGAGG TGCGCATCAA CGGCCAGGTG GTCAACCGTG TGCCCCCGGA ACAGCGCCAG
GTGAACACCG TGTTCCAGAA CTACGCGCTG TTCCCGCACA TGACCGTGCG CGACAACGTG
GCCTTCGGGC TGAAGATGCA GGGCGTGGCG GCGGACGAGA CGGCCCGCCG CGTGCTGGAC
GCCCTGCGCA TGGTGCACCT GGAAAACTTC GCCGACCGCA AGCCGCGCCA GCTTTCCGGC
GGGCAGCAGC AGCGCGTGGC CATTGCCCGC GCAGTCATCA ACAACCCGCT GGTGCTCCTG
CTGGACGAAC CGTTCAGCGC GCTGGACTTC AAGCTGCGCA AGCAGATGCA GCTTGAAATC
AAGCATCTGC AACGGCAGCT GGGCATCACC TTCGTGTTCG TCACCCACGA TCAGGAAGAA
GCCTTCGCCA TGTCCGACCG GGTGGTGGTG ATGAACGAGG GCCGCATAGA GCAGATCGGC
GCGCCCAAGG AAATCTACGA GGAACCCGCC AACATGTACG TGGCGCGCTT CGTGGGCGAC
ATCAACGCGC TGCCGGGCCG CATCGACGCC GTGCGCCTGG ACTGGTCCGC CGCGCCGGGC
ACGCCGCTGG CCCCGCCCGC GCCGGGCACC CCGGAACACG CCGCCCTGCC GCCGGACCTG
AAGCCCGGCG AACACCTGTA CGACGCCACC GTGGGCGGCA CGGTGTTTCC GGTGCGTTCG
CGCCGCAGGC TGGCCCCCGG CGACGGGGTG CAGGTGCTGC TGCGGCCGGA GGATCTGCGC
ATCGACCGCA TTGCGGTTGC CGAAACCCCG GACTGGCCGC ACCTGTGGGG CCGCATCGAG
GAATCGGTGT ACAAGGGCGC CACGGTGGAC CTGGTCATCA CCCTGGACGA CGGCCAGCGC
CTGATGGCGG CGGAGTTCTT CAACGAGGAC GACGAGGACA TCAACTACAA CCCCGGCGAG
CGCGTGGCCG TAAGCTGGGT GGACGGATGG GAGGTACTGC TGCCCGATGA CGCAGCGTAG
|
|---|
| Protein sequence | MAEQDHIIEL RGVTKTFEDT VALDSIDLTI RNGEFLTLLG PSGCGKTTIL RLVSGFEQPT
SGEVRINGQV VNRVPPEQRQ VNTVFQNYAL FPHMTVRDNV AFGLKMQGVA ADETARRVLD
ALRMVHLENF ADRKPRQLSG GQQQRVAIAR AVINNPLVLL LDEPFSALDF KLRKQMQLEI
KHLQRQLGIT FVFVTHDQEE AFAMSDRVVV MNEGRIEQIG APKEIYEEPA NMYVARFVGD
INALPGRIDA VRLDWSAAPG TPLAPPAPGT PEHAALPPDL KPGEHLYDAT VGGTVFPVRS
RRRLAPGDGV QVLLRPEDLR IDRIAVAETP DWPHLWGRIE ESVYKGATVD LVITLDDGQR
LMAAEFFNED DEDINYNPGE RVAVSWVDGW EVLLPDDAA
|
|---|
| |