Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1748 |
Symbol | |
ID | 7173663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2135432 |
End bp | 2136784 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643540263 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_002436161 |
Protein GI | 218886840 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 118 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AGCGTGAAAC CGTGACCGTG GCGGCCCCGC CGTCCAAGTC GGTGTCGCAC CGCATGCTGA TCGGGGCGGC GCTGGCCGCG GGTGATTCGG TGGTGGAACA CGTGCTGGAG AGCCGCGACA TCGAGCGCAC GGCGGACATT TTGCGGGCGG CGGGCGCGCG CATAGAGCGG CAGGGCGACG GCAGGTTCGC GGTATCGGGC GTGGCGGGCA CGCCTGCGGG CGGGTTTGAC GCGCCGGTGT CGTGCGACGT GCACGAATCG GGCACCACAT GCCGCCTGCT GACGGCGGTG CTGGCGGCGG GCAAGGGCCA GTTCCGCATC CACGGCGCGC CGCGCATGCA CGAACGGCCC ATCGGCGAAC TGGTGGACGT GCTGCGCGGG CGCGGGGTGC GCGTGACCTA TGAAGGCCGC GAAGGCTGCC CGCCCCTGCT CATCGATTCC GACGGCATGT CCGGCGGGTC GACGGCCATC GGCCTTGGCG AATCCAGCCA GTACCTGTCG GGCCTGCTGC TGGCCGCGCC GCTTACCAGC GGGCTGACCA TCGAGGTTTC CGGCGACAAG GTGGTGTCGT GGCCGTACGT GGCCCTGACC CTGCAGGCGC TGGAGGACTT CGGCATCGGC TTTCGCGTGG AAACGCGCGA GACCCCGCGC GGCAAGTGGC AGGCCGACGA CTGGAGAATG CTGCGTGAAG TACGTCCCGG CCTGGTGCGC TTCGTGGTGT CGCCGGGGGT GTACCGCGCG GGCAACTACC GCGTGGAGGG CGACTGGTCC AACGCCTCGT ACTTCCTGGC GGCGGGGGCC GTGGGCCCGC GCCCGGTGCG CGTGGCGGGC TTGCGGGTGG ATTCGTTGCA GGGCGACAGG GCCATGCTGG ACATCCTGGG CCGCATGGGC GCGCGCTTCG AGCGGGCCGA CAACGGCGTG GTAGTGGCCC CCTCCAGCCT GACCGGGGTG GAAGTGGACA TGGGCCACTG CCCGGACCTG GTGCCCACGG TGGCGGCCAC GGCGGCCTTT GCCCAGGGCG TGACCACCAT CCGCAACGTG GCGCACCTGC GCATCAAGGA ATGCGACCGA CTGTCGGCCC CGGCGGCGGA ACTGCGCAAG GCCGGGGTGC GGGTGGAGGA ACTGGACGAC GGCCTCATCG TGCATGGTTC GCTGCGCAGC GGCGGTCCGG CTCCGGTTAT TGACGAAAAA GTGATGCCAT TTTTGTCATA CGGCGACCAT CGCATGGCCA TGAGCCTTGC GCTTCTGGGC TTTGCCGGGG TACATGTAGT TCTGGACGAC CCGGCCTGCG TGGCCAAGTC GTTCCCGCAT TTCTGGAACG AGTGGGAAAA GGTGCGCGCA TGA
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Protein sequence | METKRETVTV AAPPSKSVSH RMLIGAALAA GDSVVEHVLE SRDIERTADI LRAAGARIER QGDGRFAVSG VAGTPAGGFD APVSCDVHES GTTCRLLTAV LAAGKGQFRI HGAPRMHERP IGELVDVLRG RGVRVTYEGR EGCPPLLIDS DGMSGGSTAI GLGESSQYLS GLLLAAPLTS GLTIEVSGDK VVSWPYVALT LQALEDFGIG FRVETRETPR GKWQADDWRM LREVRPGLVR FVVSPGVYRA GNYRVEGDWS NASYFLAAGA VGPRPVRVAG LRVDSLQGDR AMLDILGRMG ARFERADNGV VVAPSSLTGV EVDMGHCPDL VPTVAATAAF AQGVTTIRNV AHLRIKECDR LSAPAAELRK AGVRVEELDD GLIVHGSLRS GGPAPVIDEK VMPFLSYGDH RMAMSLALLG FAGVHVVLDD PACVAKSFPH FWNEWEKVRA
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