| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1733 |
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| Symbol | |
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| ID | 7173648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2117876 |
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| End bp | 2119525 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643540248 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002436146 |
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| Protein GI | 218886825 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA AAGCCTATAC CGGCCGCATC GTGGTGGACC CGGTCACCCG CATCGAGGGA
CACCTGAAGA TCGACGTCTC GGTCAGGAAC GGGGTGGTGG ACAACGCGTG GTCCAGCACC
CAGCTGTTCC GGGGCCTGGA AATCATCGTC AAGGGCCGCC CGCCGGAAGA CGTGCACAAC
TACGTGCAGC GCGCCTGCGG CGTGTGCACC ACCACCCACT CGCTCACCAG CATTCGCGCC
GTGGAAAACG CCATGGGCTT CAAGGCCCCC CCGGCGGCGG AACTGGTGCG CCACCTGATT
CTGGCCACGC TCATCGTGCA TGACCATCTG GTGCACTTCT ACCACCTGCA TTCGCTGGAC
TTCTGCGACG TGGCCAACGC CCTGAAGGCC GACCCGGTGG CGGCGGCCAA GCTGGCGTCA
GAGGTTTCCG GGCGCGACGT ACCCCCCGGC GACCTGTTCG TGGTGCACGG CAGGCTGAAG
AAGTTCGTGG ATGCCGGGCA GCTGGGCTGG CTGGACAACG CCTACTTCCT GGGCGGGCAC
CCGGCCTACC GCCTGTCGCC GGAAGAAAAC CTGGTGGTGG CCGCCAACTA CATCGAAGCC
TTGCGCGTGC AGATGAAGAT CGCCAAGGCC ATGGCCATCT TTGCGGGCAA GAACCCCCAT
TCGCAGACCA TGCGCGTGGG CGGGGTGACC TGCTACGAGG CCCTGCGCCC CGAACGGCTG
GCGGAATTCC GCGCCCTGTA CGAGGAGTGC CGCACCTTCA TCAACCACAA CTACCTGGGC
GACCTGACCA TTCTGGGCCG CCGCTACCCG GAGGTGGCCG CCTACGGGCG CACCACCAAC
TACATGGACT TCTCCGACTT CCACGACCCG GAAACCGGCA AAGACCCGTT CTTCCGGGGC
GGGGTGCTGT GGGGCCACGC CATCGGCAAG ACCGAGGAAC TGGACCCCGC GCAGATCCAG
GAACACCTGT CGCGCGGCTG GTACAAGCCG GGTCCGCCCG CCCACCCCTA TGACGGCGTG
ACCGACCCGG ACTACACCGG CTACGACCCG AACGGCCACT ACTCGTGGTC CAAGGCCCCG
CGCTACAAGG GCGAAGCCGT GGAAACCGGG GCGCTGGCCC GCCGCCTGAT CGCCTATTCA
CGCGGCGAGC AGGAAACCGT CACCCGCATG GACGCCTGGC TTGCCGCCTG CAAGCTGAAG
CAGGAGAACC TGTTCTCCAC CATGGGCCGC ACGGCGGCGC GCATGGTGGA AAGCGTCATC
CTGATGAACC GTGTGCAGGG CTGGCTGAAC GACCTGGAAG ACCGCGCCAA GGCCGGTCCC
GTGGAAATCT ACAGGGAATG GACCATGCCC GACGAGGCCA AGGGCGTGGG CTTCTGCGCG
GTGACGCGCG GGGGGCTTTC GCACTGGATA CGCATAGAAA AGGGCAAGAC CGCCAACTAC
CAGATGGTGG TGCCCAGCAC GTGGAACCTT GGCCCGCGCT GCGACAAGGG CAAGCCGTCC
GCAGTAGAGC AATCGCTGAT GGGCAACCCG GTGCTGGACC CCGACCGCCC GGTGGAACTG
CTGCGCACGG TGCATTCGTT CGACCCGTGC ATTGCCTGTT CCGTGCATGT GTTGCACGCC
GGGGGCAAGC GGTCGTTCCG CATCCTGTAG
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| Protein sequence | MADKAYTGRI VVDPVTRIEG HLKIDVSVRN GVVDNAWSST QLFRGLEIIV KGRPPEDVHN
YVQRACGVCT TTHSLTSIRA VENAMGFKAP PAAELVRHLI LATLIVHDHL VHFYHLHSLD
FCDVANALKA DPVAAAKLAS EVSGRDVPPG DLFVVHGRLK KFVDAGQLGW LDNAYFLGGH
PAYRLSPEEN LVVAANYIEA LRVQMKIAKA MAIFAGKNPH SQTMRVGGVT CYEALRPERL
AEFRALYEEC RTFINHNYLG DLTILGRRYP EVAAYGRTTN YMDFSDFHDP ETGKDPFFRG
GVLWGHAIGK TEELDPAQIQ EHLSRGWYKP GPPAHPYDGV TDPDYTGYDP NGHYSWSKAP
RYKGEAVETG ALARRLIAYS RGEQETVTRM DAWLAACKLK QENLFSTMGR TAARMVESVI
LMNRVQGWLN DLEDRAKAGP VEIYREWTMP DEAKGVGFCA VTRGGLSHWI RIEKGKTANY
QMVVPSTWNL GPRCDKGKPS AVEQSLMGNP VLDPDRPVEL LRTVHSFDPC IACSVHVLHA
GGKRSFRIL
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