Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1728 |
Symbol | |
ID | 7173643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2110944 |
End bp | 2111777 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643540243 |
Product | ABC transporter related |
Protein accession | YP_002436141 |
Protein GI | 218886820 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCAC TTCTTCAGTT CGACGACATG TCGTTCGCGT ATGCGTCCGG CACGACAGGG GATGGTGCGG CCAAGCCGGG CGCGGGAACC GCTGCTCCGT CGGCTCGGCC CGCCGGGCCA TCGGTCCGGC CATCCGCCGT CGCGCCTGCC GGTTCCGGCG TGCCCGCGCT CCCCGGCCTT GCCCACGTGA ACCTTGCGGT GCACCCCGGC GATTTCGTCA TGCTCACAGG GCCGTCGGGC GCGGGCAAAT CCACCCTGCT GCGGCTTGCC GTGCGGCTGG AAGAGGCCGA CGCCGGGGTG GTCCGATGTG GTGGCCGACC GGTGGCGGAC ATTCCACCGG CGGAGTTGCG CCGCACCCTG GGCTTCGTGC AGCAGACCCC CACGGTGGGC GAGGGCACGG TGCGCGACAA CCTGCTGCTG CCGTTCACCT TTGCGGCCAA CAAGGGGCTG ACCCCGCCCG ACGACGCGGA ACTGGCCGGG TGGCTGACCC GCTTTCGGCT GGCCGGGGTG GGGCTGGACG CCACGGCGGC GGCGTTGAGC GTGGGCCAGC GCCAGCGGGT GTGCATCATT CGTACGATGC TGCTGCGGCC CGCCGCCCTG CTGATGGACG AACCCACCAG CGCGCTGGAC CCGGAAAGCA GCGCGGAGGT GGAAGCCCTG ACCGAGGAAC TGAACGAGGA CGGGGTGACC GTGCTCATGG TCACCCACGG GGCCTACCGC CCGGCGCGCC GCCCCTGGCG CGACGTGCGC GTGCAGGACG GCGGGGTGCA CGAAGTGGCG GTGCCCCATC CCGTTAACGC CGCCGCAGGC ATGATTGCCG GGGGTGCCGC ATGA
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Protein sequence | MQPLLQFDDM SFAYASGTTG DGAAKPGAGT AAPSARPAGP SVRPSAVAPA GSGVPALPGL AHVNLAVHPG DFVMLTGPSG AGKSTLLRLA VRLEEADAGV VRCGGRPVAD IPPAELRRTL GFVQQTPTVG EGTVRDNLLL PFTFAANKGL TPPDDAELAG WLTRFRLAGV GLDATAAALS VGQRQRVCII RTMLLRPAAL LMDEPTSALD PESSAEVEAL TEELNEDGVT VLMVTHGAYR PARRPWRDVR VQDGGVHEVA VPHPVNAAAG MIAGGAA
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