| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1702 |
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| Symbol | rpsA |
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| ID | 7173617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2077042 |
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| End bp | 2078775 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643540218 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002436116 |
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| Protein GI | 218886795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA CCCCCGAAAA CATGGAAAAC GCCGCTCTTG AAATGGATCT GAGTTTCGAG
AGCGCCCTCG AGAATTACCT CAGCTCCGAT TTCGGCGACC TCGAAGAAGG GTCGATCATC
AAGGGCGAGG TGGTTCGCGT GGATGAGGAC AGCGTCCTCG TCGACGTGAA CTTCAAGTCC
GAAGGGCAGA TTTCCGCTTC CGAGTTCAGG GACAGCACCG GCAAGGTCAA CATCGCCGTG
GGCGACAAGG TGGACGTCTT CGTCGTTCGC AAGAACGAGA TGGAAGGCAC CATCACCCTG
TCCTTCGAGA AGGCCAAGCG CATGCAGCTC TTCGACAAGC TCGAAGAGAT TCAGGAAAAC
AACGGGGTCA TCACCGGCCG CATCGTGCGT CGCATCAAGG GCGGCTACAC CGTCGATCTC
GGCGGCGTCG AAGCCTTCCT GCCCGGTTCG CACGTGGACC TGCGCCCCGT CCCCGACATG
GACGCGCTGG TCAACCAGGA ATACGAATTC CGTGTTCTCA AGATCAACCG TCGGCGCAGC
AACGTCATCG TTTCCCGCCG CGTCCTGCTT GAAGAGGAAC GCGATTCCAA GCGTCAGGAT
CTGCTGCGCA CCCTCGAAGA GGGTCAGATC GTCACCGGCA AGGCCAAGAA CATCACCGAA
TACGGCGTGT TCGTGGACCT TGGCGGGCTG GACGGCCTGC TGCACATCAC CGACATGTCC
TGGAAGCGCA TCCGTCACCC GAAGGAACTG GTCACCCTTG GCCAGGAACT GCAGCTGAAG
GTTCTCTCCT TCGACCGCGA CAACCAGAAG GTGTCGCTGG GCATGAAGCA GCTGGTGGCC
GACCCCTGGC AGGACATCAC CGCCAAGTAC CCCGAAGGCG CCAAGCTTCA GGGCCGCGTG
ACCAACCTGG TGGACTACGG CGCGTTCGTC GAACTGGAGC CCGGCGTGGA AGGCCTGGTG
CACATTTCCG AAATGTCGTG GACCCGCAAG CTGCGCCATC CTTCCCAGAT GGTGCGCGTG
GGCGACGAAG TGGAAGTGGT CATCCTCGGC GTCGATCAGG ACAAGAAGCG CATCTCCCTC
GGCATGAAGC AGGTCAAGCC GAACCCGTGG GAAGTTGTGG CCGAAAAGTA TCCTGAAGGC
ACCATCCTTG AAGGCGTGAT CAAGAACATC ACCGAATTCG GCATGTTCAT CGGCATCGAG
GACGGCATCG ACGGCCTGAT CCACGTGTCC GACATCAGCT GGACCAAGAA GATCCGCCAT
CCCAACGAAG TGTTCAAGAC CGGCGACGTG GTGCAGGCCA AGGTGCTGAC CGTCGATCAG
GAGAACGAAA AGTTCACCCT CGGCATCAAG CAGCTGACCG AAGACCCGTG GACCCATGTG
CCCTCGCGCT ACCCGGTTGG CGGGCTGATC GAAGGCACGG TGACCAACAT CACCGACTTC
GGCCTGTTCG TTGAAGTGGA AGAAGGCATC GAAGGCCTGG TCCACGTCTC CGAAATCAGC
CAGAAGAAGA TCAAGTCTCC CTCCGAGATG TTCAAGGAAG GCGTGGTCAT CCAGGCCAAG
GTCATCCACG TCTCCGCCGA AGAACGCCGC CTCGGGCTGT CCATCAAGCA GCTCAAGGAC
GAGGAAGAAC GTCGCAAGCC CAAGGAATTC CGCGCCGGTC CCGCCGATAC GGGCGGCCAG
AACCTTGGTG ACCTGCTGAA GCAGAAGCTG GAAGAGGATG CTTCCGACAG CTAG
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| Protein sequence | MTATPENMEN AALEMDLSFE SALENYLSSD FGDLEEGSII KGEVVRVDED SVLVDVNFKS
EGQISASEFR DSTGKVNIAV GDKVDVFVVR KNEMEGTITL SFEKAKRMQL FDKLEEIQEN
NGVITGRIVR RIKGGYTVDL GGVEAFLPGS HVDLRPVPDM DALVNQEYEF RVLKINRRRS
NVIVSRRVLL EEERDSKRQD LLRTLEEGQI VTGKAKNITE YGVFVDLGGL DGLLHITDMS
WKRIRHPKEL VTLGQELQLK VLSFDRDNQK VSLGMKQLVA DPWQDITAKY PEGAKLQGRV
TNLVDYGAFV ELEPGVEGLV HISEMSWTRK LRHPSQMVRV GDEVEVVILG VDQDKKRISL
GMKQVKPNPW EVVAEKYPEG TILEGVIKNI TEFGMFIGIE DGIDGLIHVS DISWTKKIRH
PNEVFKTGDV VQAKVLTVDQ ENEKFTLGIK QLTEDPWTHV PSRYPVGGLI EGTVTNITDF
GLFVEVEEGI EGLVHVSEIS QKKIKSPSEM FKEGVVIQAK VIHVSAEERR LGLSIKQLKD
EEERRKPKEF RAGPADTGGQ NLGDLLKQKL EEDASDS
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