Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1630 |
Symbol | |
ID | 7173544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2009359 |
End bp | 2010507 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643540147 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002436046 |
Protein GI | 218886725 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 116 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAGA TAGCGCTCAA GATGCTGCTC GCCAACCGGG GCAAGTACCT CGGCATGGTG CTGAGCCTGG CCTTCACCTC GCTGATAATG ACCCAGCAGC CCGCCGTGTT CGCCAGCATT CTTGCCCGTA CCTACGGCCT CATCGACGAT ATCGCCATTG CCGACATCTG GGTCATGGAC CCGCAGGCCC AGTCGGTGGA GGAATCGAAG GCCATGCCCG ACACGCGCCT GTCGCTGGTG CGCAGCGTCA GCGGCGTGGA ATGGGCCGTG CCCCTGCACA AGGGCCAGCT GAAGGTGCGC CTGCCCGACG GCAACACCGT GGGCTGCGGG CTCATCGGCG TGGACGACGT GTCGCTCATC GGCGCGCCGG GCGTCATGCG GTCCGGCAGC ATGGCCGACC TGCGCATGGG CGACGCCGTG GTGGTGGACG CCGAGGGGGC GTCAAAGCGC CTGGCCGTGC AGACGGACCA CGGCCTGCGC CCCCTGGGCG CGGGTGACGC GCTGGAGGTC AACGACCGCC GCGCCGTGGT GGTGGGCGTG GTCAACGCCA CCCCCACCTT CCAGTCGCAG CCCACTCTTT ATACCACCTA TTCGCGGGTG AAGATGTTCA ACAAGAGCGA GCGCAAGCTG ATGTCCTTCG TGCTGGTAAA AGCCCAGCCG GGGCAGGACC ACCGCGCGCT GGCCGCGCGC ATCGCGTCGG AAACGGGGCT CACGGCCCTG ACCGCCGACG ATTTCCGCGC GCGGACGTTG CAGCACTTCA TCAAGCGCAC GGCCATCATC ATGCACTTCG GCACCACCAT TCTCATGAGC TTCTGCATCG GCGCAGTGGT CACCGGGCTG ATGTTCCACA ACTTTACCCA GGACGCGTTG CGCCACTTCG GCGTGCTGAA GGCCATGGGC GCCGACGACC GCACACTGCT GCTGATGATC CTGTCGCAGG CCCTGCTGGT GGCGGGCACC GGTTTCGGCA TCGGGGTGGG CATGGCCATG ATCATGGGCA ACCTGCCCGG CGACCCCATG GGCATGCGCC TTTCGCCGCT GATCCTGGCG GTGGGCGGCG GCGCGGTGCT GTCCATCACC CTGGTTTCGG CGGCGCTCAG CATCCGTCAG GTGCTGCGGC TGGAACCGGC CATGGTGTTC AAGCAGTAG
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Protein sequence | MYQIALKMLL ANRGKYLGMV LSLAFTSLIM TQQPAVFASI LARTYGLIDD IAIADIWVMD PQAQSVEESK AMPDTRLSLV RSVSGVEWAV PLHKGQLKVR LPDGNTVGCG LIGVDDVSLI GAPGVMRSGS MADLRMGDAV VVDAEGASKR LAVQTDHGLR PLGAGDALEV NDRRAVVVGV VNATPTFQSQ PTLYTTYSRV KMFNKSERKL MSFVLVKAQP GQDHRALAAR IASETGLTAL TADDFRARTL QHFIKRTAII MHFGTTILMS FCIGAVVTGL MFHNFTQDAL RHFGVLKAMG ADDRTLLLMI LSQALLVAGT GFGIGVGMAM IMGNLPGDPM GMRLSPLILA VGGGAVLSIT LVSAALSIRQ VLRLEPAMVF KQ
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