| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1536 |
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| Symbol | |
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| ID | 7173447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1893516 |
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| End bp | 1895453 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643540050 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002435952 |
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| Protein GI | 218886631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 0.767792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAGG TTCGGGAATT GGCAAGAAAC CGTACGCTGC AACAGTGGAG TGTCGAAGAC
TCCGCTGAGC TCTATGGCAT CCGCAATTGG GGTGCCGGGT ACTTCGATGT CGCCCAGAGC
GGCGATGTCG TGGTCTATCC TTTCGGAGAC AACCGCGGTC CTGCCGTAAG CATCCCGGAA
ATCATCCGGG GCATGCGGGA GCGCGGCTAT GACATGCCGG TGCTCCTGCG CATCGAGAAC
ATTCTCGATT CCCAGATCAC CAGTCTTCAC CAATCCTTCC GCAAGGCCAT CGGGTCGCTC
GGTTACAAGG GCGAATACCG GGGCATCTTT CCCATCAAGG TCAATCAGCA GCAGCAGGTG
GTCGAAAAGA TCGCCCAGTT CGGCTCGCGC TACCACCACG GGCTGGAGGT AGGCAGCAAG
GCCGAACTCA TCGCCGCCGT CTCGCAACTG CGCGACCACG AGGCCTGCCT TGTCTGCAAC
GGCTACAAGG ACGAGGAGTT CATCGACCTT GGCCTGCACG CCGTGCGCAT GGGCTACAAG
TGCTTCTTCG TGCTGGAAAT GGCCAGCGAG CTGCCGCTCA TTCTGGAGCG CTCCAAGTGC
CTTGGCGTGC GTCCGCTCAT CGGCGTGCGC GCCAAGCTGT CCGTGAAGGC GGGCGGCCAC
TGGACCGATT CCGGCGGCGA GCGTTCCACC TTCGGCCTGA CCACGGCGCA GATCGTCGAC
GTGGTGGACC AGTTGAAGGA CCACGACATG CTCGACTGCT TCCAGCTGCT GCACTACCAT
CTGGGGTCGC AGGTGCCGAA CATCCGCGAC ATCCGCGCCG CGGTCATGGA AGCCTGCCGC
ATCTACGGCG GCCTGGTGGC CGAAGGCGCG GCCATGGGCT ATCTGGACCT TGGCGGCGGC
CTTGCCGTGG ATTACGACGG CTCGCACACC AACTACGTGA GCAGCCGCAA CTACAGTCTT
GACGAATACT GCGCGGACAT CATCGAGGCG GTGATGAACA TCCTCGACGA GGAAGGCATC
GCCCATCCGC ACATCGTCAC CGAATCGGGC CGCGCCACCG TGGCCTACTA CTCCATGCTG
CTGTTCAACA TCCTGGACGT GAGCCGCGTG GAGATCGGCA ACCTGCCCGA CATCCTGCCC
GACGACTGCC CCGAGCCCGT GCGCAACATG CGCGAGGCAC TGGCCGGTCT TACCCTGCGC
AACCTGCAGG AATGCTACAA CGACGCCGTG TACTACCGCG ACGAAGTGCG CCAGCAGTTC
CTGACCGGGC GCATCACCCT GCGCGAACGC ACCCTTGGCG AACGCTACTT CTGGGCCATC
ATGAAGCGCA TCGCCCAGGA AAAGCAGAAG CTGAAGCATG TGCCCAAGGA TCTTGCCGAG
ATAGACGTGG CCCTGGCCGA CATCTACTAC GGCAACTTCA GCGTGTTCCA GTCGCTGCCC
GATTCGTGGG CCATCGACCA GCTGTTCCCG GTGGTGCCCC TGCACCGCCT GAACGAGCTG
CCCTCTCGCC AGGGCATCCT GTCCGACATC ACCTGCGACA GCGACGGGCG CATCGACCAC
TTCATCGACC CGCAAGGCGT GAAGGGCACC CTTGACCTGC ACCCGCTTAA GGACGGCGAG
GAATACTACC TCGGCGTGTT CCTGGTGGGG GCGTATCAGG AAACCCTGGG CGACCTGCAC
AACCTGCTGG GCGACACCAA CGTGGTTTCG GTGCGCGTGC ACGAGGACGG CAGCTACGAA
TTCGTGCGCG AACTGCGCGG CGATTCGGTG GCCGACATCC TTTCGTACGT GGAATACGAC
CCCCGACGCA TCATCGACGA CATCCGCGAG GCTGCGGAGC AGGCCGTGCG CGAGGGGCGC
ATCACCCCCT CCGACCGGTA CCGGGTGATG CAGGCGTATG AGGATGGGTT GCGGGGTTAT
ACCTACTTCG AACGCTAG
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| Protein sequence | MYEVRELARN RTLQQWSVED SAELYGIRNW GAGYFDVAQS GDVVVYPFGD NRGPAVSIPE
IIRGMRERGY DMPVLLRIEN ILDSQITSLH QSFRKAIGSL GYKGEYRGIF PIKVNQQQQV
VEKIAQFGSR YHHGLEVGSK AELIAAVSQL RDHEACLVCN GYKDEEFIDL GLHAVRMGYK
CFFVLEMASE LPLILERSKC LGVRPLIGVR AKLSVKAGGH WTDSGGERST FGLTTAQIVD
VVDQLKDHDM LDCFQLLHYH LGSQVPNIRD IRAAVMEACR IYGGLVAEGA AMGYLDLGGG
LAVDYDGSHT NYVSSRNYSL DEYCADIIEA VMNILDEEGI AHPHIVTESG RATVAYYSML
LFNILDVSRV EIGNLPDILP DDCPEPVRNM REALAGLTLR NLQECYNDAV YYRDEVRQQF
LTGRITLRER TLGERYFWAI MKRIAQEKQK LKHVPKDLAE IDVALADIYY GNFSVFQSLP
DSWAIDQLFP VVPLHRLNEL PSRQGILSDI TCDSDGRIDH FIDPQGVKGT LDLHPLKDGE
EYYLGVFLVG AYQETLGDLH NLLGDTNVVS VRVHEDGSYE FVRELRGDSV ADILSYVEYD
PRRIIDDIRE AAEQAVREGR ITPSDRYRVM QAYEDGLRGY TYFER
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