| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1505 |
|---|
| Symbol | |
|---|
| ID | 7173416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1857111 |
|---|
| End bp | 1858403 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643540019 |
|---|
| Product | protein of unknown function DUF140 |
|---|
| Protein accession | YP_002435921 |
|---|
| Protein GI | 218886600 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 96 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAA CCGTTCCCCC GTTCCGAGAA CCCACCCTCA AGGGCGACTA CCGGCGTCCC
GACCCGGACG CCCACGCCGG GCAGCACGAG CCGGGGCTGG TCTGCACGCC TGCCGCGTCG
TGCGTGGAGC CCGGCCCCAG CGACGGGATG GACGACGGGA TGGGCAGGGG CGCGCGCGAA
CTGGTGCTCA CCTTTTCCGG CGTGTGGGAC GTGGCCTCAA TCGGCCGCAT GACCGCCCGG
CTGCTGCGCC GCTGCGCCGA GGTGGGCAAC GCCTGTTCGG TGCAGGGCGA TGCCCCGGTG
GTGCATCTGG ACCTGGCCGA AGTGACCCGC CTGGATACCG CCGGTGCGCA ACTGCTGTGC
CGGGCCGCCG CCAGCATGGC GACGGCGGGG GCGCGCGTGG TGTGGCACGT GTCCGACCAT
GGCCAGTCCA TGCTGCTGGA CAGGGTGCGT GCCATCGACA TTTCCGCGGT GCCGCGCGCA
CGCCGCATAT CTCCCGTGGT GGGCGCGCTG AACGCCATCG GCGGCTCCAT CGTGGAGGAA
CTGGAACAGG CCCGTGCCAT CATCGGCTTC CTGGGCATGT TCCTGGTTTC GCTGGCGGCG
GCGGTGGCCC GACCGTGGCG GCTGCGCTGG GTGTCCATCG TGCACCACAT GGAACAGACC
GGCATTCAGG CCGTGCCCAT CGTGGCCCTG CTGACCTTCC TCATCGGGCT GGTCACCGCG
TACATGGGGT CGGAGCAGTT CACCCGCTTC GGGGCGCAGG TGTTCGTGGT GAACCTGATA
GAGGTTTCCA CCCTGCGCGA ACTGGGCGTG CTGCTGACGG CTCTCATCGT GGCGGGGCGC
TCCGGCTCGT CGTTCACCGC CCAGATCGGG GCCATGGTGG CCAACGAAGA GGTGGACGCC
ATGCGCTCCA TGGGGCTGGA CCCCATGGAG GTGCTGGTGA TTCCCCGCGT GGTGGCCCTG
GTGCTGATGC TGCCGGTGCT CACCTTCATC GCCGACTTCA TGGGCGTGCT GGGCGGGGGC
ATTGCCTCGT GGCTGTCGCT GGGCATATCG CCCGGCGCGT TCGCGGTGCG CTTCCAGGAA
ATCACCCGGC TGGCCAACTT CGTCACCGGG CTGGTCAAGG CACCGTTCTT CGCGCTGATC
ATCGGCATCG TGGGGTGCTT CCAGGGCTTT CGGGTGACCG GCAGCGCGGA GTCGGTGGGG
CGGCTGACCA CCCAGGCGGT GGTGGAGTCG ATCTTCCTGG TCATCGTGGC CAACGCGGGC
TTCGCCATAC TGTTCATGTC GCTGGGGGTG TAG
|
|---|
| Protein sequence | MRETVPPFRE PTLKGDYRRP DPDAHAGQHE PGLVCTPAAS CVEPGPSDGM DDGMGRGARE
LVLTFSGVWD VASIGRMTAR LLRRCAEVGN ACSVQGDAPV VHLDLAEVTR LDTAGAQLLC
RAAASMATAG ARVVWHVSDH GQSMLLDRVR AIDISAVPRA RRISPVVGAL NAIGGSIVEE
LEQARAIIGF LGMFLVSLAA AVARPWRLRW VSIVHHMEQT GIQAVPIVAL LTFLIGLVTA
YMGSEQFTRF GAQVFVVNLI EVSTLRELGV LLTALIVAGR SGSSFTAQIG AMVANEEVDA
MRSMGLDPME VLVIPRVVAL VLMLPVLTFI ADFMGVLGGG IASWLSLGIS PGAFAVRFQE
ITRLANFVTG LVKAPFFALI IGIVGCFQGF RVTGSAESVG RLTTQAVVES IFLVIVANAG
FAILFMSLGV
|
|---|
| |