| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1499 |
|---|
| Symbol | |
|---|
| ID | 7173410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1849823 |
|---|
| End bp | 1850971 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643540013 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_002435915 |
|---|
| Protein GI | 218886594 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 98 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC GCATGCGCAC CTTCGTCCGT CAGGTCGCCA CCACCGGGGC GACAACGCCC
CCCCATCGCC CGTGCCGGAC GCTGGCCGTG GCCCTGCTCC TGCTGGCCGC GCTGGCCATT
GCCTTCACCG TGCCCGCCGC TGCCCATGCC GGGCAGCCAG CCGGACAATC CGGCGTACAC
CAGAGCCAAC AGCCCGACAG GCGCGCGGAC GGGGGGGCGA CCGTGCGGAC GGATGGGCGG
ACGGATGGGC GGACGGACGG GCAATCGGAC AGACAGGCAG GCGGAGCGGT GTCCATCACC
GACGATACGG GTCGCGAAGT GCGCCTGCCC CACCCAGCCC GGCGCATCGT GGCCCTGTAC
GGGGCGTTCA ACGAACTGCT GGCGGCCATG GACATGACGG ACCGCGTGGC GGCGCGCACC
GCCGCCGACG AGGAACCCGC CGCCATTCGC TCCCTGCCGG TCATCGGCAC GCACATGCGG
CCCAGTCCGG AGATGGTGGC CGCCGTGGCC CCGGACCTGG TGTTGCAGAT GGAGGGCCGC
CGCGAAGCGG GCGAGGCCGT CGAAGGCCTG CGCGCGCTGG GCATTCCCGT GGCGGTGTTC
CGGGTGGGCT CGTTCGGGGA ATTGTTCGGC GCGCTGCGCC GCATGGGCAC CCTGACCGGC
GAGCCGCAAC GCGCCACCGC GCTGGAAGCG GCCCTGCGCA CCCGGCTGGA CGCCGTGGCC
GCGCGGGTGG CCGACCGCCC CCGGCCCGCC GTGTTCTTCG AGGTGCGGTA CCCCAACCTG
CTGGCCGCCG GGGCCGATTC CATCGTCACC GACATCATCG CCCACGCGGG TGGCCGCAAC
TGCGTCACCG CCGAAGGGCG GGTGGCCCGC CTGAGCGAAG AGGAGTTGCT GCGGCTCGAC
CCCGCCGTCT ACCTGCTGCA ACGCGGCCCC ATGAACCCGG AGCCGGAACC GCCCGCCACG
CGCCCCCATT ACGCAACCCT GTCCGCCATA CGGAATGGCC GCGTGCGTGA AGTGGACGAG
GCGCGGTATT CCCGCCCCGG CCCCCGCGCC GTGGATGCCG TGGAGGAGCT TGCCCGCTAC
CTGCACCCCG ATGTATGGGG CACCACTCCG GCCACACCCG CAGCCGACCG CAAGCAGACT
GCCCCCTGA
|
|---|
| Protein sequence | MTDRMRTFVR QVATTGATTP PHRPCRTLAV ALLLLAALAI AFTVPAAAHA GQPAGQSGVH
QSQQPDRRAD GGATVRTDGR TDGRTDGQSD RQAGGAVSIT DDTGREVRLP HPARRIVALY
GAFNELLAAM DMTDRVAART AADEEPAAIR SLPVIGTHMR PSPEMVAAVA PDLVLQMEGR
REAGEAVEGL RALGIPVAVF RVGSFGELFG ALRRMGTLTG EPQRATALEA ALRTRLDAVA
ARVADRPRPA VFFEVRYPNL LAAGADSIVT DIIAHAGGRN CVTAEGRVAR LSEEELLRLD
PAVYLLQRGP MNPEPEPPAT RPHYATLSAI RNGRVREVDE ARYSRPGPRA VDAVEELARY
LHPDVWGTTP ATPAADRKQT AP
|
|---|
| |