Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1446 |
Symbol | lpxC |
ID | 7173350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1768205 |
End bp | 1769155 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539953 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_002435862 |
Protein GI | 218886541 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA CCACCATCAA GAAAAACATC GAATGCTCGG GCGTCGGCCT GCACGGCGGC AAGATGGTCC ACCTGACCAT GCGTCCCGCC CCCGAAGACA CCGGCATCGT GTTCGATATC CATACCGCCC AGGGCGTGCG CCGCGTGGCC CCCAATCCCC AGTCGGTGGT CGCCACCGGC CTTGCCACCA CTCTCGGCGT GTCCGGCAGC GGGCATGACG CTGCTGTGGC CACTGTGGAG CACCTGCTTG CCGCCATTCG CGGCCTCGAG ATCGACAACA TGATCATCGA GGTGCAGGGC GGCGAAGTGC CCATCATGGA CGGCAGCGCC GCCTCCTTCG TCATGCTGCT GCGCAACGCG GGCATCCGCA CCCAGTCGCG CGCCCGCCGC GTACTGCGCA TCGCCAAGCC CATCAGCCAC GAAAGCGACG GCAAGTCCAT CCGCGCCCTG CCCTACAACG GCTTTCGCGT GGACTACACC ATCGACTTCG CCCATCCGCT CATCGGCGTG CAGCACATGA GCCTGGAGGT AACCCCCCGC ACCTTCGCCG AAGTGGCCAA GGCGCGCACC TTCGGCTTTC TGCGCGAAGT GGAGTACATG CACAGCAAGG GCCTGGCCCT TGGCGGCTCG CTGGACAACG CCGTGGTGCT CGACGACTAC GCCGTGCTCA ACGACGACGG CCTGCGCTTT CCCGACGAAT TCGTGCGCCA CAAGATCCTG GACTTCATCG GCGACATGGC CATGCTGGGC ACCCCGCTGC AGGGGCACTT CATCGTGCAC TGCTCCGGCC ATGCCCTGAA CAACGCCTTC CTGCGCGTGC TGACCGACAA CGCGGACATC TACCTGCAGG AAGTGACGCT GGACGAACCC GCCGCCGAAC GTGCAGCCCG CCGTCCCGCC GTTGCACCGG CCCATGCGCC TGCGCATGTG GGCAACCCCG CAACGGCCTA G
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Protein sequence | MNQTTIKKNI ECSGVGLHGG KMVHLTMRPA PEDTGIVFDI HTAQGVRRVA PNPQSVVATG LATTLGVSGS GHDAAVATVE HLLAAIRGLE IDNMIIEVQG GEVPIMDGSA ASFVMLLRNA GIRTQSRARR VLRIAKPISH ESDGKSIRAL PYNGFRVDYT IDFAHPLIGV QHMSLEVTPR TFAEVAKART FGFLREVEYM HSKGLALGGS LDNAVVLDDY AVLNDDGLRF PDEFVRHKIL DFIGDMAMLG TPLQGHFIVH CSGHALNNAF LRVLTDNADI YLQEVTLDEP AAERAARRPA VAPAHAPAHV GNPATA
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