Gene DvMF_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1421 
Symbol 
ID7173325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1738458 
End bp1738868 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content63% 
IMG OID643539928 
Productthioesterase superfamily protein 
Protein accessionYP_002435837 
Protein GI218886516 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCT TTCCCGTGCC GGAAATCTGG TTGGCCCATC GCGTGTCCTA CGGTGAAACG 
GACATGATGG GCGTTGTGTA CTATGCGGAA TACCTGCACT TCTTCGAGCG TGCCCGCAGC 
GAATTCATCC GCTCGCGGGG CATGGGCTAT GCCACCGTGG AAGAGCGCGG CATCATCCTG 
CCGGTGCGCG AGGCACGCTG CCGCTACCGC AGCTCGGCCA GGTTCGACGA CCTGATCCAG 
ATACGCGCGG GCATCAGTGA ATGGGGCCGC GCCTCGCTGA CCTTCGTGTA CGAGATTCGG 
GACGAGGGAC GCAACAGGTT GCTTGCCGAT GGCATGACCC AGCATGCCTG CATCAACCGC 
GACGGCAAGC CGGTGCCGGT GCCCGGCTGG CTGCGTAACC TGCTGAAATA A
 
Protein sequence
MDGFPVPEIW LAHRVSYGET DMMGVVYYAE YLHFFERARS EFIRSRGMGY ATVEERGIIL 
PVREARCRYR SSARFDDLIQ IRAGISEWGR ASLTFVYEIR DEGRNRLLAD GMTQHACINR 
DGKPVPVPGW LRNLLK