| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1404 |
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| Symbol | |
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| ID | 7173308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1715541 |
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| End bp | 1717727 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643539911 |
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| Product | helicase, RecD/TraA family |
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| Protein accession | YP_002435820 |
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| Protein GI | 218886499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGG CGCAGGACGC CCCGGAACAA CTTTCCGGCG TGCTCGACCG CGTCATCTTC
CACAACGAGG AAAACGGCTA CACCGTGCTG CGCCTGCGCC CGCTGCCCAA GGGCGACATG
ATCAGCGTGG TGGGGCACAT GGTTTCGCCG CAGCCGGGGG CCTCTTTGAA GCTGGTGGGC
CGCTGGGTGA ACAACCCGCG CTTCGGGCGG CAGTTTTCCA TGGAAAATTA CGAGAACCTG
CTGCCTGCCT CTGTTGAGGG CATCCGCCAT TATCTCGGCT CCGGCCTCAT CAAGGGCGTG
GGCGAATCCA TGGCCGCGCG CATCGTGGAT GCCTTCGGCG AGGACACCTT TCGCGTGCTG
GACGAAGAGC CGGACAGGCT GCTGCGCGTC AGCGGCGTGG GCGGCAAGAC GCTGGAGCGC
ATCAAGGCGG GCTGGTCCGA CCATCAGGGC ATCCGCGACC TGATCATGTT CCTGCAACCG
CACGGGGTCA GCACCGCCTA TGCCGTGCGC ATCTACCGCC ACTACGGGCA GCAGGCCCTG
GCGGTGGTGC GCGAGAATCC CTACCGCCTG GCCATGGACA TCCACGGCAT CGGCTTTCAT
ACCGCCGACA CCGTGGCGGA AAAGCTGGGC TTCTCGCGCG ACAGCGAACT GCGGGCAGAG
GCGGGCACCC TGTACACCCT GCAACGCCTG AACGACGACG GCCACGTCTA CGTGCCGCAC
GACGCGCTGA TCACCCACAC CTCGGACCAG CTGGACATCC GCGCCGACCT CGTGGAGGAC
GCCCTGCGCA CCCTGGAGAT AGAGGAGCGC ATCGTCATCG AGGAAATGGA CGGCGAGCTC
GGGGTGTTCC TTTCCCGCTA CCATCATTAC GAAACCAAGA TCGCCTACTA CCTGCAACGG
GTGCTGCGTT CGCCGAAAGC CGTGCACTTC GAGAACCCGG AAGCCGTCAT CGCCGAGGTG
CTGGCCAAGC TGTCCATCAC CCTTGCGCCG GAGCAGCTGG AGGCCGTGCG CACCGCCACC
CGTTCCAAGG TCATGGTGCT TACCGGCGGC CCCGGCACCG GCAAGACCAC CATCATCAAC
GCCATCATCA AGGTCTTTGC CGAAACGCGC GCCAAGATCC TGCTGGCCGC GCCCACGGGC
CGCGCCGCCA AGCGCATGTC CGAGACCAGC GGGCGCGAAT CCAAGACCAT TCACCGTCTG
CTGGAGTACA GCCCCAAGGA GGACGGTTTC GCCCGCAACG AGGACAACCC CCTCGCCTGC
GGCCTGCTGG TGGTGGACGA GGCGTCCATG ATGGACACCA TGCTCATGTA CCACCTGCTG
AAGGCCGTGC CGCTGGGCGC CACGCTGCTC TTCGTGGGCG ACGTGCACCA GCTGCCCTCG
GTGGGGCCGG GCAACGTGCT GCGCGACGTC ATCGCCTCCG GCGTGGTGCC GGTGGTGGAA
CTGGTGGAGG TGTTCCGCCA GGCCGCCGAA AGCGAGATCA TCTGCAACGC CCACCGCATC
AACCACGGCG AGGTGCCTCC GCTGGAATCC TCGCGCGACC GGCTGTCCGA CTTCTACTTC
ATCCGGCAGG ACGACCCCGA GAAGGCCGTG GAGATGATCG TGGAACTGGT GCGCGACCAC
ATCCCGCGCC GCTTCGGCCT GCATCCCGTC AACGACATCC AGGTGCTTAC CCCCATGCAC
AAGGGCGCGG TGGGCGCAGG CAACCTGAAC GTGCGCCTGC AACAGGCCCT GAACGGCCAG
ACCCTGTGCG TGCAGCGCGG CGAGCGCCAG TACCGTCTGG ACGACAAGGT GATGCAGATC
CGCAACAACT ACGACAAGGA CGTCTTCAAC GGCGACATCG GGCGCATCTG TCTGGTGGAC
CCCAAGGAGC GTCAGCTCAC AGTGCGGTTT GACGAGCGCA ACGTGCCCTA TGCCTGGGAA
GAACTGGACG AGATTGTCCC CGCCTACGCC ATCTCGGTGC ACAAGTCGCA GGGGTCCGAA
TACCCCGCCG TGGTCATCCC CGTGCTGACA CAGCATTACA TGCTGCTGCA ACGCAACCTC
ATCTACACCG GCGTCACCCG CGGCAAGCGC CTAGTGGTGC TGGTGGGCGA GCCGCGCGCC
CTGGCCATGG CCGTCAAGAA CAACCGCATG CACAAGCGCC ACACCCGGCT GGCCCGGCGG
TTGGCCTTGG GTGTGGGGGT GGGGTAA
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| Protein sequence | MQEAQDAPEQ LSGVLDRVIF HNEENGYTVL RLRPLPKGDM ISVVGHMVSP QPGASLKLVG
RWVNNPRFGR QFSMENYENL LPASVEGIRH YLGSGLIKGV GESMAARIVD AFGEDTFRVL
DEEPDRLLRV SGVGGKTLER IKAGWSDHQG IRDLIMFLQP HGVSTAYAVR IYRHYGQQAL
AVVRENPYRL AMDIHGIGFH TADTVAEKLG FSRDSELRAE AGTLYTLQRL NDDGHVYVPH
DALITHTSDQ LDIRADLVED ALRTLEIEER IVIEEMDGEL GVFLSRYHHY ETKIAYYLQR
VLRSPKAVHF ENPEAVIAEV LAKLSITLAP EQLEAVRTAT RSKVMVLTGG PGTGKTTIIN
AIIKVFAETR AKILLAAPTG RAAKRMSETS GRESKTIHRL LEYSPKEDGF ARNEDNPLAC
GLLVVDEASM MDTMLMYHLL KAVPLGATLL FVGDVHQLPS VGPGNVLRDV IASGVVPVVE
LVEVFRQAAE SEIICNAHRI NHGEVPPLES SRDRLSDFYF IRQDDPEKAV EMIVELVRDH
IPRRFGLHPV NDIQVLTPMH KGAVGAGNLN VRLQQALNGQ TLCVQRGERQ YRLDDKVMQI
RNNYDKDVFN GDIGRICLVD PKERQLTVRF DERNVPYAWE ELDEIVPAYA ISVHKSQGSE
YPAVVIPVLT QHYMLLQRNL IYTGVTRGKR LVVLVGEPRA LAMAVKNNRM HKRHTRLARR
LALGVGVG
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