Gene DvMF_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1320 
Symbol 
ID7173224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1612320 
End bp1612739 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID643539828 
Productnickel responsive regulator 
Protein accessionYP_002435737 
Protein GI218886416 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.00541993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCGCA CCATCCGCTT CGGCGTCTCT CTCGATTCCG ACCTGCTCGA AAAGTTCGAT 
GCCCTGTGCG ACGACCGCTG CTACCAGACC CGGTCGGAAG CCATCCGCGA CCTGATCCGC 
AACACCCTGG TCCAGCAGGA ATGGGAAGAC ACCGACCGAG AAATCGCGGG CACCCTCACC 
ATCGTGTACG ACCACCACAA GAGCGATCTG GCACAGCGGC TGACCGAAAT CCAGCACGAC 
CACCACGGCA TCATCATCAC CTCGCTGCAC GTGCACCTGG ACCACCACAA CTGCCTCGAG 
GTGCTGGTGC TGAAGGGCCC CGGCGCGGAC GTGCGCACCC TGTCGCAGCG GCTCATTTCC 
ACCAAGGGCG TGAAGCACGG CAAGCTTTCG CTTACCACCA CCGGGCAAGA CCTCACCTAA
 
Protein sequence
MGRTIRFGVS LDSDLLEKFD ALCDDRCYQT RSEAIRDLIR NTLVQQEWED TDREIAGTLT 
IVYDHHKSDL AQRLTEIQHD HHGIIITSLH VHLDHHNCLE VLVLKGPGAD VRTLSQRLIS 
TKGVKHGKLS LTTTGQDLT