| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1156 |
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| Symbol | |
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| ID | 7173058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1417854 |
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| End bp | 1420274 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539668 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002435578 |
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| Protein GI | 218886257 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.0240405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTAG ACACTCTCAG GATCACCACC AAGATGTACT CCGGGGTCAT CGGCGTGGTG
CTGTGTACCA TTGTGGTCCT GTCCGGCCTG GTGGCCTGGC GCACCCAGGG TACGCTGAAC
AGGATGGGGC GCGACAACCT TGCCGGGTTC ATGGATGCCA TGTGCGACGT GGCGGCCATG
CAGGATCGCA TTGGCGGCGA GGCGCTGCAC AACAGTCTGG AAGCGCTGGC CAGCGGACTG
CTGGGCCAGG GCGAACTGAA CCTCAGCGCG TCCGGCGCCG CCACGCATCA GGTGGCGGAC
CAGACCACCG GGGCCACATC CTCCGTATCC GTGCCGGATT TCGAACTGAG CAACGACGGC
ATGCCCCTGC CCTTCTCGCC CAACTCGCTG GTGGAACGGC ACAAGCGCAC CGTGGGTTCC
GACGCCACCC TGTTCGTGCT GCTGCCCGGC AAGCTGCTGC GCGTGGCCAC CACCATCACC
GACGCCCAGG GCAAGCGCGC CATCCACACC TACATCCCCG ACTCCAGCCC CGTATACAAG
GCCATTGCCG CGGGCAACGA CTACACGGGC CGGGCCATGG TCATGGGCAA GGCCTTCCGC
ACCCATTACC GCCCGATAAA GGACGCCTAC GGCAAGGTCG TCGGCGCGAT GTTCGTGGGC
GAGCCCCTGC TTACCGAAGC CTTCCGCACC ATGTTCGGCC AGGCCCAGGT GGGTGGGCGC
GGCTACACCT TCATCTTCTC GCCCGACGGC ACCCGCGTGC TGCACCCCAC CCGCACCGGC
ACCAACATCC GGCAGGACGT CTACGGCAAG CAGATGCTGG AAACCCGCAA CGGGTTCCTG
GAATGGGAGT ATCAGGGCCA CAAGGTGGGC TACGTGCGCT ATTTCGAGCC GTGGGACATG
TACCTGGCCG TGGCCATGAC CCGCGACGAG ATGCTGCAGG GCGCGGACAC CGACATGCTG
CGCTGGACGG CGGGCGGCGG CGTGGCCGCG CTGGCGCTGG CGGTGCTGTT CGTGTGGCTG
CTGGTGCGCG AACTGATGAA GCCCATGGGG CAGCTGGCCG CCTATGCCCG CACCGTGGCT
GCGGGCGATT TTTCCGCCAC CATGCGCTAC GAGGCGCGCG ACGTCGTGGG CGACACCATT
GGCGCCGTCA ACGCCATGGT GGCCGAGATG AAGAACAAGC TCGGCTTCAC CCAGGGCGTG
CTGAACGGCA TGACCATGCC CTTTGCCATC AGCTCGCCCG ACGAGAAGGT GCTGTTCACC
AACGACGCGC TGGTGCGCCT GCTCGAGCGC CCCGGCACCC CGAAGGACTG GGAGGGCAGG
CAGCTGGACC GCTTCGTGTA TGGCCGCGAA GTGGACGACA TGGCCACCCG CCGCTGCCTG
AAGAGCGGCA GCGCCGAATG CAACCTGAGC GTGGACCTGA CCACGGAGAC CGGCAAGACC
GTGCACGCCC AGGTGGACGT GGCCCCGCTG TACGACCTTG ACGGCACCCT CATCGGGGCT
TTCACCATCT ATGCCGACGT CACCGACCTG CGCGCCCAGC AGGCCCGCAC AGAGGCCCAG
CACGCCGCCA TCACCCGCGT GGCCGAACAG GCCGACGCCA TCGCCCGTCA GGTGGCCACC
GCGGCGGACG AACTGGCCAA TCAGGTGCAG GACGCCAACG GCGGCGCCGA CAGGCAGCGC
GCCCGCGCCT CAGAGACGGC CACGGCCATG GAACAGATGA ACGCCAGCAT GCTGGAGGTG
GCCCACAACG CCTCGCAGGC GGCGGCCAAC GCCGAGGGCG CGCGGGCCAA GGCCGACGAG
GGCGAACACC TGGTGGCCGA CGTGGTGCAG GCCATCACCG GCGTGCGTGC CCTGGCCATG
GACCTGCGCA CCAACATGGA AGGGCTGGGC CGCCAGGCCG AGGACATTGG CCGGGTGATG
CAGGTCATCG AGGACATCGC CGACCAGACC AACCTGCTGG CGCTGAACGC GGCCATCGAG
GCGGCCCGCG CCGGTGACGC CGGGCGCGGA TTCGCCGTGG TGGCCGACGA GGTGCGCAAA
CTGGCCGAAA AGACCATGGG CGCCACCCGC GAGGTGGGGC AGGCCATCGC CTCCATCCAG
TCCGGCGCAC GCGACAACGT GCAGGCCACG GCGGCAGCCG TGGACGCGGT GGTGCGTTCC
ACCGAACTCA CCGAAAAGTC CGGCGGCGCG CTGAAGGAAA TAGTGACCAT GGTGGACCAG
ACCGCCGACC AGGTACGCTC CATCGCCACG GCCAGCGAGC AGCAGTCCGC CGCCAGCGAG
CAGATCAGCC GGTCCACCGA AGAGGTGAAC ATGATCGCGC AGGACACCGC GCAGATCATG
TCCCGCTCGG CCACGGCGGT GCACGACCTG GCCGGACTGG CGGGCGACCT GCGCCGCCTG
ACCGCCGAGA TGCGCGCCTG A
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| Protein sequence | MRLDTLRITT KMYSGVIGVV LCTIVVLSGL VAWRTQGTLN RMGRDNLAGF MDAMCDVAAM
QDRIGGEALH NSLEALASGL LGQGELNLSA SGAATHQVAD QTTGATSSVS VPDFELSNDG
MPLPFSPNSL VERHKRTVGS DATLFVLLPG KLLRVATTIT DAQGKRAIHT YIPDSSPVYK
AIAAGNDYTG RAMVMGKAFR THYRPIKDAY GKVVGAMFVG EPLLTEAFRT MFGQAQVGGR
GYTFIFSPDG TRVLHPTRTG TNIRQDVYGK QMLETRNGFL EWEYQGHKVG YVRYFEPWDM
YLAVAMTRDE MLQGADTDML RWTAGGGVAA LALAVLFVWL LVRELMKPMG QLAAYARTVA
AGDFSATMRY EARDVVGDTI GAVNAMVAEM KNKLGFTQGV LNGMTMPFAI SSPDEKVLFT
NDALVRLLER PGTPKDWEGR QLDRFVYGRE VDDMATRRCL KSGSAECNLS VDLTTETGKT
VHAQVDVAPL YDLDGTLIGA FTIYADVTDL RAQQARTEAQ HAAITRVAEQ ADAIARQVAT
AADELANQVQ DANGGADRQR ARASETATAM EQMNASMLEV AHNASQAAAN AEGARAKADE
GEHLVADVVQ AITGVRALAM DLRTNMEGLG RQAEDIGRVM QVIEDIADQT NLLALNAAIE
AARAGDAGRG FAVVADEVRK LAEKTMGATR EVGQAIASIQ SGARDNVQAT AAAVDAVVRS
TELTEKSGGA LKEIVTMVDQ TADQVRSIAT ASEQQSAASE QISRSTEEVN MIAQDTAQIM
SRSATAVHDL AGLAGDLRRL TAEMRA
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