| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1122 |
|---|
| Symbol | |
|---|
| ID | 7173023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1378795 |
|---|
| End bp | 1380240 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643539633 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_002435544 |
|---|
| Protein GI | 218886223 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGC ACAGCACCGT TCCCGGCCAT ACGGCCCAAT GCCCGCAACA CGCAGCACAC
CGCCCGGCGG CCCATGCCGC CCACGCCACC GCACCGACCG CCCAAACCGG CCTGCCTGGG
TCGACGCGCC AGTCTGGTCC GGCTCGCCTG TCGGGCATTG CCCTTCTGGC GCTGGCGGTT
GCCATGCTGC TCGCAGCGCC CGTGGCGCAC GCATCCAGCC ACGAAACGCT CGACGTGCGC
TCCGCCATGC TGCTGGACAT GAGCACTGGC CGCATCATTT ACGAACAGAA CGCCGACGAG
CCCATTCCCC CCGCATCGCT CACCAAGGTA CTGTCCATGT ACGTGGCGCT GGACCAGGTG
CGCGCGGGCA AGGCATCGTT GAAGGACACG GTCAAGGTCA GCCGCCGCGC CTTCTCCACG
GGTGGGTCGC GCATGTTCCT GAAACAAGGC GAAACCCTGA CCCTGGACGA TCTTCTGGAA
GGCATGGCCG TTTCCTCGGG TAACGACGCC AGCGTCGCCA CCGCCGAACA CATCGGCGGC
AACGTGGACA ACTTCGTCCA GATGATGAAC GCAAAGGCCC GGGCGCTGGG CATGAAGAAC
AGCGTGTTCC GCAACCCGCA CGGCCTGCCC GCCGCCGGGC AGCACACCAC CGCTCGCGAC
ATGCTTGCCC TTTCCCGCGC CTACCTTGCC CAGTACCCGG AAGCCCTGCG CTACCATTCC
ACCCGGTACA TCAAGCACAA CAAGGTCATC ACCACCAACA AGAACCCCCT GCTCGGCAAC
TGCGAAGGGG CAGACGGCCT CAAGACTGGC TGGGTGTTCG CCTCCGGCTA CAACCTCATC
TCCACGGTGA AGCGCGGCAA GACCCGACTG CTGGCAGTGG TGCTGGGCGC GGAAACCACC
CAGGCCCGTG CCCAGGAAGT GAACCGGCTG GTGGAGGCGG GCTTCCGCTC CGTGGCCGGT
GGCGGCAAGA GCGTCTCCAC GCTGCTGGCG GACATGAGGC CCGCCGACTA CGCCCTGAAC
CTGCACAAGA CCAACAGCGA GGCTTACGCC GAGTTGCGCA AGACCTCCAA GGCCACCAAG
GCGCGCAAGA CCTCCGTGGC TGCCGCCAAG GCCTCGGAAG ACGCCAAGGC CGCCACCGCG
CAGAAGAAAT CCAAAAAGAA GAAGGCTGCC GCCACCGCGG AAAAGGCCAC CTCCGCCAAG
ACGGCGCAAA AGACCGCGCC CAAGGCCGCC AAGGCTGCGG CGTCTGCCGC GCCCAAGGCA
ACCAAGGCCA AAGCCATGGC CCAGGCGAAG CAGTCCGAGC GCAAGGCCGT GGCCAAGGCG
GAAGACCAGG AGCCCGGCCC CAAGGCCTCC AGAAAAAAAT CTTCGCCCAC CAAATCCACG
GCGGACAAGA CGCCCGCCCC CGGCAAAAAG GCCGCCCCGC GCGAGGTGGC CGACAAACAG
GGCTGA
|
|---|
| Protein sequence | MRMHSTVPGH TAQCPQHAAH RPAAHAAHAT APTAQTGLPG STRQSGPARL SGIALLALAV
AMLLAAPVAH ASSHETLDVR SAMLLDMSTG RIIYEQNADE PIPPASLTKV LSMYVALDQV
RAGKASLKDT VKVSRRAFST GGSRMFLKQG ETLTLDDLLE GMAVSSGNDA SVATAEHIGG
NVDNFVQMMN AKARALGMKN SVFRNPHGLP AAGQHTTARD MLALSRAYLA QYPEALRYHS
TRYIKHNKVI TTNKNPLLGN CEGADGLKTG WVFASGYNLI STVKRGKTRL LAVVLGAETT
QARAQEVNRL VEAGFRSVAG GGKSVSTLLA DMRPADYALN LHKTNSEAYA ELRKTSKATK
ARKTSVAAAK ASEDAKAATA QKKSKKKKAA ATAEKATSAK TAQKTAPKAA KAAASAAPKA
TKAKAMAQAK QSERKAVAKA EDQEPGPKAS RKKSSPTKST ADKTPAPGKK AAPREVADKQ
G
|
|---|
| |