| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1104 |
|---|
| Symbol | |
|---|
| ID | 7173005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1353317 |
|---|
| End bp | 1353988 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643539615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002435526 |
|---|
| Protein GI | 218886205 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.0738368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA ATTTTTCGCC AGCATGCCGG GCCGTACGCC CGGCCCCCGC GTACCCTGGT
GCCATCCGGT CACGGGTCCG CCGTCTGCTC TCGCGGTCTT TGCCGGGCCT GCTGCTGTTG
TGCGCCGCGC TGGTCTGCGC GGGCTGCGTG CGCGGCCCCG GCAGCCTTGC GCCGGACCCC
GCCCGACCCG CCGCCGAGCG GATCATCCCC GACGTGCCGT TCTTTGCGCA GGAACAATAC
CAGTGCGGCC CCGCCTCGCT GGCCGGGGTG TTGCGCCACA TGGGGCTGAC GGGCGCCCAG
GCCACGCCGG ACGGCATTGC CGACGTCATC TTTCGTCCGG GCATGCACGG CACGCTTTCG
CTGGACCTTG CCCTGTACCC GCGCACCCTC GGGCTTTCCA GCCGCTGGTA CGACGGTTCC
GTGGCCGACC TGATGGCCGC CGTGGATTCC GGCCAGCCGC GCATCGTCAT GGTGGACCAC
GGCTACGGGC CGGTGAGCAC CTATCATTTC ATGGTGGTGG TGGGCTACGC GCCCGACGCG
GTCATCGTGA ATTCCGACCG CACCCCCCTG CAACGGCTGC CGTGGGCTTC GTTTCTGCGC
ACCTGGGACC GCACCGACCG CTGGACCCTG GAGGTCCGGC GGCAGGAACC GGCCCCCGCG
CCCGCCCCGT AG
|
|---|
| Protein sequence | MPMNFSPACR AVRPAPAYPG AIRSRVRRLL SRSLPGLLLL CAALVCAGCV RGPGSLAPDP
ARPAAERIIP DVPFFAQEQY QCGPASLAGV LRHMGLTGAQ ATPDGIADVI FRPGMHGTLS
LDLALYPRTL GLSSRWYDGS VADLMAAVDS GQPRIVMVDH GYGPVSTYHF MVVVGYAPDA
VIVNSDRTPL QRLPWASFLR TWDRTDRWTL EVRRQEPAPA PAP
|
|---|
| |