Gene DvMF_1051 details

Gene Information

• Locus tag: DvMF_1051
• ID: 7172952
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1283869
• End bp: 1284516
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643539563
• Product: TPR repeat-containing protein
• Protein accession: YP_002435474
• Protein GI: 218886153
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4235] Cytochrome c biogenesis factor

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 93
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGCAGA CAAACCGAGC GCAGGGCCGT CAGCAACAGG ACGGCGACTA CGTCCGCAAG 
TCCACCATGT ACATGGCCGT GGCCGTGGCG CTGGTCGTTG GCGCGTTCCT TGGCGTGCAG 
GTGACGAGCC TGTATTCGCC CGCGCCCGCG CAGGAAAAGC GCGCCGTGTC CGCCCCCAGC 
CAGCAGTCCC AGAACGGCCC GGCCAACCAG ATATCGCCCG ACGTCATGGG CCGCATTCTG 
GAAATGGAGC AGGCGGTGCT GAAAGACCCC AACGACGTGG CCGCATGGAC CAAGCTGGGA 
CACCTGTACT TCGACACCGA CCAGCCCAAG AAGGCCATCC CCGCCTACGA GAAGTCGCTG 
GCGCTCAAGC CCAACGACCC GGACGTGCTG ACCGACCTTG GCGTGATGTA CCGCGAAGAC 
CACCAGCACG ACCGCGCCCT GGCCACCTTC GAGAAGGCCA TTGCCGCCAA TCCCAAGCAC 
CAGATTGCCC GCTTCAACAA GGGCATCGTG CTGTACTTCG ACCTGGAACG GAAGGACGAC 
GCCTTGAAGG CCTGGCGCGA ACTGCTGGCC ATCAACCCCG ACGCCAAGGC CCCCAACGGC 
CAGCCGCTGA AGGAAATGAT GCAGTCGTTG CAGCAGCAGA GCAAGTAG 

 

Protein sequence

MSQTNRAQGR QQQDGDYVRK STMYMAVAVA LVVGAFLGVQ VTSLYSPAPA QEKRAVSAPS 
QQSQNGPANQ ISPDVMGRIL EMEQAVLKDP NDVAAWTKLG HLYFDTDQPK KAIPAYEKSL 
ALKPNDPDVL TDLGVMYRED HQHDRALATF EKAIAANPKH QIARFNKGIV LYFDLERKDD 
ALKAWRELLA INPDAKAPNG QPLKEMMQSL QQQSK