Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1049 |
Symbol | |
ID | 7172945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1275173 |
End bp | 1276438 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643539556 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002435472 |
Protein GI | 218886151 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCCT TTCCCGATCA CCAGGATCCC CGCGCCACCG GTCCGTTGCG GGTATTCCGC CATCGCAACT ACCGGCTGTT CTTCGCCGGG CAGGCCATTT CGCTGCCCGG CACCTGGATG CAGTCCATGG CCCAGTCGTG GCTGGTCTAC CGGCTGAGCG AATCCAGCTT CGTTCTGGGG GCGCTGGGCT TTGCCGCGCA ATTGCCGCTG TTCGTGCTGT CCGTGTTCGG CGGCGCGCTG GCCGACACGC GCGACAGGCG CGCCATACTG GTGGCCACGC AGGTGGCCTC CATGCTGCTG GCGCTGACTG CCGCCGCGCT GACCATGACC GACGTGGTGC AGGTGTGGCA CGTATTCGTG CTGGCCACGG CGCTCGGCAT CGTCAACGCC TTCGACGTGC CCACGCGGCA GTCCTTCATC ATGGACATGG TGGGGCGCGA CGATCTGCCC ACGGCCATCG GCCTCAACTC GTCCATGTTC AACGCGGCGC GTGTGGTCGG GCCAACCCTG GCGGGGCTGG TGGTGGCCGC CGCGGGCGAA GGGTGGTGCT TTCTGCTCAA CGGCATCAGC TTTGTGCCCG TCATCGCGGG GCTGATGATG ATGCGCCTGC CCGTCCACGT GCCCCCGCCG CCCGGCCCTT CCACGTTGCA GCGCATCCGC GAGGGGCTGG GCTTTGCCGC GCGCCACGAA GGTATCCGCA CCACCCTGCT GCTTGTGGGG GCCACCAGCC TCATCGCGGT GAACTATTCC GTGCTGATGC CGGTGGTGGC CGACAAGGTG CTGGGCGGCA ACGCCAGGAC ACTGGGCCTG CTGCTGGGGG CCGCCGGGGC GGGTGCGCTG CTGGGCGCGC TGTGCCTTGC CCTGCGGCGC AGCAGCGACG GGCTGTCACG ATGGGCGCTG TACGGGGCTG TTGGACTGGG GGCCAGCCTG ACGGCATTCG CGCTGTGCCG GTCGGTGTGG ACGGCGCTGG TGGCGCTGGT GCCCGTGGGC ATGTGCATGG TGGTGCTGAT GGCATCGGCC AACACGCTGC TGCAAATCAT GTCGCCCGAC GCCTACCGGG GCCGGGTCAT GGCCCTGTAT TCCATGATGT TCCTGGGCAT GGGGCCGTTC GGCTCGCTGC TTGGGGGCAG CGTTGCCCAT GCGCTGGGCC CATCGCTCAC GCTGCTGCTG TCCGGCATCG TCTGCCTGGG CAACGCGCTG TGGTTCGGGG TGTGGCTGCG GCGGCACGGC CCGTCGCTGG CTGGCGTGGG GCGCGAGACA AGTTGA
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Protein sequence | MPPFPDHQDP RATGPLRVFR HRNYRLFFAG QAISLPGTWM QSMAQSWLVY RLSESSFVLG ALGFAAQLPL FVLSVFGGAL ADTRDRRAIL VATQVASMLL ALTAAALTMT DVVQVWHVFV LATALGIVNA FDVPTRQSFI MDMVGRDDLP TAIGLNSSMF NAARVVGPTL AGLVVAAAGE GWCFLLNGIS FVPVIAGLMM MRLPVHVPPP PGPSTLQRIR EGLGFAARHE GIRTTLLLVG ATSLIAVNYS VLMPVVADKV LGGNARTLGL LLGAAGAGAL LGALCLALRR SSDGLSRWAL YGAVGLGASL TAFALCRSVW TALVALVPVG MCMVVLMASA NTLLQIMSPD AYRGRVMALY SMMFLGMGPF GSLLGGSVAH ALGPSLTLLL SGIVCLGNAL WFGVWLRRHG PSLAGVGRET S
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