Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1020 |
Symbol | |
ID | 7172915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1236422 |
End bp | 1237498 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643539526 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002435443 |
Protein GI | 218886122 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 0.773796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACAACAGAAC ACCCCGGACG GTGACCGACG AGCCACGCCT GCTGGACGTG CGCGACCTGA GCGTGGAATT TCCGGGGCGG CCCGAGGCGG ACGGCACGCC GGGCGCTCCC CTGCGCGCCG TGGCGGGGAT ATCCTTTTCC ATAGCGCCGG GGGGCACGCT GTGCCTGGTG GGCGAATCGG GCTGCGGCAA GAGCATGACT GCGCTGGCCC TGCTGCGCCT GGTGCCCGAG CCGGGGCGCG TTGCCTCCGG GTCGGTGCGG CTGGAGGGGC GGGAACTGCT GACCCTGCCG GAACCGGAAA TGCGCGGAGT GCGCGGGCGC AGCATTTCGA TGATCTTTCA GGAGCCCATG ACCTCGCTGA ACCCGGTGTT CCGGGTGGGC GAGCAGATTG CCGAGGGGGT GCGGCTGCAT CTGGGCCTTT CCCGGTCCGA TGCAGCCGCG CGCGCCGTGG ACCTGCTGCG ACAGGTGGGC ATTCCCTCGC CGGAACTGCG CGCCCGCGAC TTTCCGCACC AGATGAGCGG CGGCATGCGC CAGCGGGTGA TGATCGCCAT GGCGCTGGCC TGCGACCCGC GCCTGCTCAT CGCCGACGAA CCCACCACCG CGCTGGACGT GACCATCCAG CGCCAGATAC TGCGCCTGAT GCGCGACCTT GCCGCCCACA GGGGGGCATC GGTGCTGCTG ATCACCCACG ACCTCGGCGT GGTGGCGGAA ACCGCCGACC ACGTGGCCGT GATGTATGCG GGCAGGATCA TGGAACATGC GTCGGTGGGT GATTTTTTCG CGCGCCCGCT GCATCCCTAT GCCCAGGGGC TGATGCGCTC GGTGCCGCAG GCCGTTTCCG GCCCGAGGGC CGAACGGCTG TCGGCCATTC CGGGCACGGT GCCGCCGCTG TGGGCCCTGC CATCCGGCTG CACCTTCCGT GACCGTTGCC CGCACGCCTT CGCCCGGTGC GCCGAGCAGG AACCGCCCCT GCTGGCCATG CCGCCACAGG CACTCGCCGC CACTCCCACG GACAACGCGG CGCAGGCGCA CGGCGTGCGC TGCTGGCTGC ACGCCCCCAA GAAATGA
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Protein sequence | MTDDNRTPRT VTDEPRLLDV RDLSVEFPGR PEADGTPGAP LRAVAGISFS IAPGGTLCLV GESGCGKSMT ALALLRLVPE PGRVASGSVR LEGRELLTLP EPEMRGVRGR SISMIFQEPM TSLNPVFRVG EQIAEGVRLH LGLSRSDAAA RAVDLLRQVG IPSPELRARD FPHQMSGGMR QRVMIAMALA CDPRLLIADE PTTALDVTIQ RQILRLMRDL AAHRGASVLL ITHDLGVVAE TADHVAVMYA GRIMEHASVG DFFARPLHPY AQGLMRSVPQ AVSGPRAERL SAIPGTVPPL WALPSGCTFR DRCPHAFARC AEQEPPLLAM PPQALAATPT DNAAQAHGVR CWLHAPKK
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