Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1010 |
Symbol | |
ID | 7172905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1225022 |
End bp | 1226287 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539516 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002435433 |
Protein GI | 218886112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 0.905477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACG TTCGTTCCAC GTACACCGAT GCGGTCGGCT TCTTTGGCCG GACCACGCCC GAAGAACTGG CGGCCGCCTT CGGCAGCCCC CTGTACGTCT ACAGCGAGGC CCTGCTGCGC AAGCGCTGCC GCGACATGAA GGCCCTGTCG TCGCATCCCG GCTTTTTCGT GAACTATTCG GCCAAGGCCA ACACCAACCT TTCCCTGCTG CGCATCGTGC GCGAGGAAGG GCTGGTGGTG GACGCCATGT CGCCCGGCGA AATCCACGTC AACAAGGCCG CCGGGTTCAC CCCGGACCAG ATCCTGTACG TGTGCAACAA CGTGTCCGAG GCGGAACTGG CCAACGCCGT GTCGCATGGC CTTCTGGTGA GCGTGGATTC GCTGTCGCAG CTCGAAACCC TGGGCAGGGT GAACCGGGGC GGCAAGGTGA TGGTGCGCTT CAACCCCGGC ATCGGCGCGG GGCACCACCA GAAGGTGGTC ACGGCGGGCA AGGCCACCAA GTTCGGCGTG GACCCCTCCG AGGCCTCGCT GGCCGAGTTG CGGGCCATTC TGGCCAGACA CGACATGACC CTGGCGGGCA TCAACCAGCA CATCGGCTCG CTGTTCCTCG AACCGGAAGG CTACGTGGCG GCGGCGGACT TCCTGCTGTC CGTGGCGGAA AAGTTCGACA CCGTGGAGGT CATCGACTTC GGCGGCGGCT TCGGCATTCC GTATCGCAAG TACGAGGACC AGCCCCGGCT GGACCTGGCC GCCACGGCGG AACGCCTGCA CGCGCTCATT TCCGGCTGGT CGGAACGCAC CGGCTACAAG GGCCGCTTCT ACATCGAGCC GGGCCGCTAC GTGGTGGCCG AATGCGGCCT GCTGCTGGGC ACCGTGCACG CCACCAAGAA CAACGGCCCC ACCCGCTACG TGGGCACCGA CCTTGGCTTC AACGTACTGG CCCGCCCGGT GATGTACGAC GCGCACCACG ACATCGAGGT GTACCGCAAT AACGGAACGC CCGACGCGGC CCTGCACCCC CAGACCGTGG TGGGCAACAT CTGCGAGAGC GGCGACATCA TGGCCAGGGA ACGGCAGCTG CCCGCCATCC AGGAGGGCGA CATTCTGGGC GTGCTGGACG CCGGGGCCTA TGGCTACGCC ATGAGCTCCA CGTACAACCA GCGGTTGCGC CCCGCCGAGG TGCTCATCGG CCTTGATGGT GAGCCCCGCC TGATTCGCCG CCGGGAAGAG TTGGCCGATC TGATGGCCCT TTTTCCCGAT GCGTAG
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Protein sequence | MPNVRSTYTD AVGFFGRTTP EELAAAFGSP LYVYSEALLR KRCRDMKALS SHPGFFVNYS AKANTNLSLL RIVREEGLVV DAMSPGEIHV NKAAGFTPDQ ILYVCNNVSE AELANAVSHG LLVSVDSLSQ LETLGRVNRG GKVMVRFNPG IGAGHHQKVV TAGKATKFGV DPSEASLAEL RAILARHDMT LAGINQHIGS LFLEPEGYVA AADFLLSVAE KFDTVEVIDF GGGFGIPYRK YEDQPRLDLA ATAERLHALI SGWSERTGYK GRFYIEPGRY VVAECGLLLG TVHATKNNGP TRYVGTDLGF NVLARPVMYD AHHDIEVYRN NGTPDAALHP QTVVGNICES GDIMARERQL PAIQEGDILG VLDAGAYGYA MSSTYNQRLR PAEVLIGLDG EPRLIRRREE LADLMALFPD A
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