Gene DvMF_0984 details

Gene Information

• Locus tag: DvMF_0984
• Symbol: thrS
• ID: 7172878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 1192037
• End bp: 1193971
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643539489
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002435407
• Protein GI: 218886086
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 0.234013
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAACGTGA CCATCGAAGG ACAGGTGTTC GACGTGCAGT CCGGCGTCTC CTGCCGTGAC 
GCCCTCAAGG GCGCCCTGAG CGGGAAGAAG TTCAAGAATG TCGTAGCCTG CCGCTGCAAC 
GGCACCCCGC TCGACCTCAC CGCCACCGTG CCCGCCGACA CCACCACCAT CGAACCGGTC 
TTCGCCGATT CGCCGGAAGG CATCGAACTC ATTCGCCACT CCGCCGCGCA CATCATGGCG 
GAAGCGGTGC AGAAGCTGTT CCCCGGGGTG AAGGTGACCA TCGGTCCCGC CATCGACAGC 
GGGTTCTACT ACGATTTCGA CTACGAGCGC CCCTTCTCCG TTGACGACCT CGAAGCCATC 
GAGGCGGAAA TGCAGAAGAT CGTGGCTGCC GCGCATCCCT TCACCCGCAC GGAAATGACC 
AAGGACGAGG CCGTGGCCCT GTTCGAGGGC ATGGGCGAGG CCTACAAGGT CGAGATCGTG 
CGCGACATTC CGGCGGACAC GGTGTCCGTG TACCGCAGCG GCGACTTCGT CGACCTGTGC 
CGCGGCCCGC ACATTCCCGA CACCAGCTTC GTGAAGGCGT TCAAGCTGCT CTCCGTGGCT 
GGCGCCTACT GGCGCGGCGA CGAGAAGAAC CGCATGCTTT CGCGGGTGTA CGGCACCGCC 
TTTGCCGACC CGAAGGCCCT GAAGGACCAT CTGCACCAGA TCGAAGAAGC CAAGCGCCGC 
GACCACCGCA AGCTGGGCCA GCAGCTGGAC CTGTTCGCCT TCCACGAGGA CGTCGCCCCC 
GGCATGGTCT ACTGGCATCC CAAGGGCATG CTGCTGCGCA CCATCCTCGA GGACTTCCTG 
CGCAAGGAAC ACCTGAAGCG TGGGTACGAA CTGGTGCAGG GGCCGCAGCT TCTGCGCCGC 
GAGGTGTGGG AAAAGTCGGG CCACTACGAC AACTACCGCG AGAACATGTA CTTCACCGTC 
ATCGACGACA ACGCCTATGG CGTGAAGCCC ATGAACTGCG TCTCGCACAT GCTCATCTAC 
AAGAGCCACC TGCGCAGCTA CCGCGACCTG CCGCGCCGCA TGTTCGAACT GGGCGTGGTG 
CACCGCCACG AAAAGTCGGG CGTGCTGCAC GGCCTGTTGC GCGTGCGCCA GTTCACCCAG 
GACGATGCGC ACATCCTGTG CCGCCCCGAC CAGCTGGAAG CCGAGATCAT CGGCGTCATC 
GCGCTGGTGC GCGACCTGAT GGGCCTGTTC GGGTTCGACT ACCGCATCGT CATCTCCACC 
CGACCGGAAA AGTCCATCGG CTCGGACGAG GACTGGGACC GCGCCACCAA CGCGCTCATC 
GGCGCGGTGG CCACGGCAGG CCTGTCGCAC ACCATCAACG AGGGTGACGG CGCCTTCTAC 
GGCCCCAAGA TCGACATCAA GGTCACGGAC GCCATCGGGC GCGAGTGGCA GCTGTCCACC 
ATCCAGGTCG ATTTCACCTT GCCTGACAGA TTCGACTTGG TGTACATCGG GCAGGATGGC 
GAGCGCCATC GCCCGGTTAT GGTCCACAGG GCCATCCTGG GTTCGCTCGA ACGCTTCATC 
GGCGTGCTTA CGGAGCACTT TGCCGGGGCC TTTCCCACGT GGATCGTCCC GGTTCAGGCG 
CGCCTGCTGA CCGTCACCGA CGCCCAGAAC GATTTCGCCA TGGGCGCGCG TGATCAGCTT 
GTGGCCGCGG GCCTTCGCGT GGAGGCCGAT ACGCGCAATG AAAAGCTGGG CTACAAGGTC 
CGCGAAGCCC AGTTGGAAAA GATCCCCTAC ATCCTCGTGG TGGGGGACAA GGAAGTGGAG 
GCCGGAGGCG TCAACGTGCG ACTGCGCAAT GGCGAAAACC TTGGCCTCAA GACCCTTGCC 
GAAGTGGCGG AGATGATCAG GGCGGACTGC CAGGAACCGT TTAAACGTGG AGGAATGAGC 
TATAGCTTCT CCTAA 

 

Protein sequence

MNVTIEGQVF DVQSGVSCRD ALKGALSGKK FKNVVACRCN GTPLDLTATV PADTTTIEPV 
FADSPEGIEL IRHSAAHIMA EAVQKLFPGV KVTIGPAIDS GFYYDFDYER PFSVDDLEAI 
EAEMQKIVAA AHPFTRTEMT KDEAVALFEG MGEAYKVEIV RDIPADTVSV YRSGDFVDLC 
RGPHIPDTSF VKAFKLLSVA GAYWRGDEKN RMLSRVYGTA FADPKALKDH LHQIEEAKRR 
DHRKLGQQLD LFAFHEDVAP GMVYWHPKGM LLRTILEDFL RKEHLKRGYE LVQGPQLLRR 
EVWEKSGHYD NYRENMYFTV IDDNAYGVKP MNCVSHMLIY KSHLRSYRDL PRRMFELGVV 
HRHEKSGVLH GLLRVRQFTQ DDAHILCRPD QLEAEIIGVI ALVRDLMGLF GFDYRIVIST 
RPEKSIGSDE DWDRATNALI GAVATAGLSH TINEGDGAFY GPKIDIKVTD AIGREWQLST 
IQVDFTLPDR FDLVYIGQDG ERHRPVMVHR AILGSLERFI GVLTEHFAGA FPTWIVPVQA 
RLLTVTDAQN DFAMGARDQL VAAGLRVEAD TRNEKLGYKV REAQLEKIPY ILVVGDKEVE 
AGGVNVRLRN GENLGLKTLA EVAEMIRADC QEPFKRGGMS YSFS