Gene DvMF_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0927 
Symbol 
ID7172821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1124044 
End bp1124751 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID643539432 
Productprotein of unknown function UPF0005 
Protein accessionYP_002435350 
Protein GI218886029 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.441127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGAC GCACGGTCTC CGCACCCACG AGGGCGCGGG CTGAAACCGT CAACGCCTTC 
ATGCGCGGTG TATACAACTG GATGTTCGTG GGGCTTGCCG TGACGGCTGG TGCCGCGTGG
TTCACGGCGT CGAGCCCGGC CATGCTGCAA CTGGTGTTCG GCAACAGCTT CGTGCTGATC
GGCCTGATCC TTGCCGAACT CGGCCTGGTC ATGGGCATCA GCGCGGGCAT CGCACGCCTT
TCCGGCGGCG CTGCCACCGG GCTTTTCGTG CTGTACAGCG CGTTGAACGG CATCACCCTT
TCCGCGGTGC TGCTGGCCTA CACCTCAGGA ACGGTGTTTC AGGCCTTCGC CACGGCGGCG
GGCATGTTCG GCGCCATGTC CCTTTACGGC CTGACCACCA AGAAGGACCT CACCTCGTGG
GGCAGCTTCC TGTTCATGGG CCTCATCGGC ATTCTCATCG CCAGCGTGGT GAATATCTTC
GTGGGCAGTT CGGCCATGTC GCTGGTCATC AGCGCCATCG GCGTCATCGT GTTCACGGGC
CTGACCGCCT ATGACAGCCA GAAGCTGCGC ATGATGGGCG AAACCGCCCC CATGGACGAT
GCCACCGCCA TCCGGCGCGG CACCATCCTG GGCGCGCTGA CGCTGTACCT GGACTTCATC
AACCTGTTCC TGATGCTGCT GCGCCTGTTC GGCTCTTCGC GCGACTAG
 
Protein sequence
MLGRTVSAPT RARAETVNAF MRGVYNWMFV GLAVTAGAAW FTASSPAMLQ LVFGNSFVLI 
GLILAELGLV MGISAGIARL SGGAATGLFV LYSALNGITL SAVLLAYTSG TVFQAFATAA
GMFGAMSLYG LTTKKDLTSW GSFLFMGLIG ILIASVVNIF VGSSAMSLVI SAIGVIVFTG
LTAYDSQKLR MMGETAPMDD ATAIRRGTIL GALTLYLDFI NLFLMLLRLF GSSRD