| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0898 |
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| Symbol | |
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| ID | 7172787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1082059 |
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| End bp | 1083585 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643539398 |
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| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
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| Protein accession | YP_002435321 |
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| Protein GI | 218886000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.00115945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCGGA CCCCACGGCA TGACGCGGAC CTGCTGGTCA TCGGCGGCGG CGCCGCAGGG
CTGACGGCGG CTGCGGGCGC GGCGCGCTTC GGCGCGCGGG TGGTGCTGGC CGAGCGGGAA
CCCGCCCTGG GCGGCGACTG CCTGCACCAC GGCTGCGTGC CCAGCAAGAC CCTGCTGGCC
ACGGCCCGGG CGCGCCATGT CATGCGCCGC GCCGCGCTGT TCGGCCTGCC CGCGCCGGAA
CTGGAGCCGG TGGACTTCGC CGCCGTGGCC CGGCGCATCC GCGAGGTGCA GGCCGTCATC
CAGCGCCACG ATTCTCCGCA ACGCTTCACC GGGTTGGGGG TGGACGTGCG CTTCGGCCCG
GCGCGCTTTT GCGACGAACA CACCGTGGAG ATCGGCGGGC GGCGGGTAAG CGCCGCACGC
ATCCTCATCG CCACAGGTTC CTCGCCGCAG TTGCCGCCCC TGCCGGGGCT GGACACGGTA
CCCTTCCTGA CCAACCGAGA TATCTTTTCT CTGGATGCGC TGCCCGCATC ACTGCTGGTG
CTGGGCGGCG GTCCCATGGC GTGCGAGATG GCCCAGGCCT TCGCCCGGCT GGGTTCGCGG
GTGACCATGG TGTTGCGCGG TCCGCGCATC CTGCCGCGCG ATGACGCGGA CATGGCCGGG
GTGGTGCATG CCTCCCTGGC TGCGGACGGG GTGCGCGTGC TGGCCGGAGC CACGGTGAAG
ATGCTGCGCG CGGTGTCTGC CATATCTGGC AGGTTTGGCA AACCGGGCGA ACCGGTTGGG
GCTGACGGAA ATGACGCAGC CGGAACGGGC GTGGAAGCAG AACTGGAAGT GCCCCAGGGC
GAGGGGCGCG GGCCGCTCGT GGTCCGTGCG GATCGGCTGC TGGCTGCACT GGGCCGCACG
CCGGAAACCG CCGGGCTGGA CCTTGCGGCG GCGGGCGTGG CCACCGGCAG GCACGGCGGC
ATCACGGTGG ATGGCCGCAT GCGCACCAGC CAGCCGCATG TTTTCGCGGC GGGCGACGTG
ACCGGAGACT GGCAGTTCAC CCACGCGGCA GGGCACGAGG CCGGGGTGGT GGTGGCCAAT
GCGGTGCTGC GTCTGCCGCG CCGGGCGGAC CATGCGCGCA TGCCGTGGTG CACCTTCACC
GACCCCGAAC TGGCATCCGT GGGTTGCAAC GAGCGCATGG CCGCCGAACG CGGCCTGCCC
GTGGACGTGC ATGTGGAGCC CTTTGCGGCC AACGACCGCG CCCTGGCCGA AGGCACGCCC
GAAGGACGCC TGAAGCTGGT GCTGCGCAAG GGCGGCAACA GGGTGCTTGG CGTGCAGGCC
GTGGGGCCGC ACGCGGGCGA GGTGCTGAAC GAATGGGTGG CGGTGCTGGG CGGCGGGGTG
CGCCTTTCCG CGCTGGCCGG GGCCGTGCAT CCCTATCCCA CGCTGGGCGA GATTTCGGCC
CGCGCTGCGG GCAACGTGGT GTCGCGGGTG CTGTTTTCCG TCGGTGCGCG CAGGCTGCTG
CGCCTGCTGT TCGGTTACCG GGGGTGA
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| Protein sequence | MARTPRHDAD LLVIGGGAAG LTAAAGAARF GARVVLAERE PALGGDCLHH GCVPSKTLLA
TARARHVMRR AALFGLPAPE LEPVDFAAVA RRIREVQAVI QRHDSPQRFT GLGVDVRFGP
ARFCDEHTVE IGGRRVSAAR ILIATGSSPQ LPPLPGLDTV PFLTNRDIFS LDALPASLLV
LGGGPMACEM AQAFARLGSR VTMVLRGPRI LPRDDADMAG VVHASLAADG VRVLAGATVK
MLRAVSAISG RFGKPGEPVG ADGNDAAGTG VEAELEVPQG EGRGPLVVRA DRLLAALGRT
PETAGLDLAA AGVATGRHGG ITVDGRMRTS QPHVFAAGDV TGDWQFTHAA GHEAGVVVAN
AVLRLPRRAD HARMPWCTFT DPELASVGCN ERMAAERGLP VDVHVEPFAA NDRALAEGTP
EGRLKLVLRK GGNRVLGVQA VGPHAGEVLN EWVAVLGGGV RLSALAGAVH PYPTLGEISA
RAAGNVVSRV LFSVGARRLL RLLFGYRG
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