| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0897 |
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| Symbol | |
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| ID | 7172786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1080643 |
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| End bp | 1081545 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643539397 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_002435320 |
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| Protein GI | 218885999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.00175083 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGTGG CCGGGGGACT CTGGCGCGCG GTGGAGCACG CCGTGTCGGT GGGGGCGCAG
GCCTTGCAGG TGTTCACCGC CAATCAGCGG CGGTGGGAGG TGCCCTGTCC TTCGGATGGT
GACGCCAGGC GCTTTCGTGC CGCCGTGTCC GACTGGGGCG GGGGCTTCGT GGCCTCGCAC
GCATCGTACC TGTTCAATCT CGCCTCGCCC GACGAGGGCG CCGGAGCGCG CTCGGTGCGC
GGGTTGGCGG CAGAGATCGG GCGGTGCGGC CTGCTGGGCA TTCCGTGGGT GGTACTGCAT
CCCGGCGCGC ATCTGGAAGG AGGCGATAGG CAGGCCGTGG AGCACGGCGT CCATCGGGTG
GCCGCGCGGC TGGCCGCAGC CTTCGACGCG GCGGGACACC TGCATCCCCA TGCCGACGGC
GTGGGCGTGC TGCTGGAAAA CACCGCCGGG CAGGGCACCT GCCTTGGGGG CGATGTGGCG
GACCTTGGAC GCATCGTGGA TGCCTGTCCG GCCCGCGAAC GGCTGGGGGT GTGCATCGAC
ACGGCCCATG CCTGCGCCGC CGGGTACGAC CTGGCGACGG AGGAGGGTTA CGCGCGGCTG
ATGGCGGCGG TGGAGGGCGC GGTGGGGCTT GGGCGGGTGC GCCTGTTCCA CGTCAACGAC
AGCGCCACGC CATGCGGCGC GCGCAGCGAC CGGCACGCGC ACATCGGGCT GGGGCACGTG
GGGGCCGCCG GGTTTGCCCG GCTGGTGCGC GACCCGCGTT TTGCCGCCCA CCCCATGGTG
CTGGAAACGC ACAAGGGCAA GGATATGGCA GAGGACCGCC GCAACCTGCG GGTGCTGCGC
CGCCTTGCCG CGGGTGATGA TCCGGGCAAG GCCGCGTGCG ACGTGGAAGG GCTGAAGGAA
TAG
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| Protein sequence | MSVAGGLWRA VEHAVSVGAQ ALQVFTANQR RWEVPCPSDG DARRFRAAVS DWGGGFVASH
ASYLFNLASP DEGAGARSVR GLAAEIGRCG LLGIPWVVLH PGAHLEGGDR QAVEHGVHRV
AARLAAAFDA AGHLHPHADG VGVLLENTAG QGTCLGGDVA DLGRIVDACP ARERLGVCID
TAHACAAGYD LATEEGYARL MAAVEGAVGL GRVRLFHVND SATPCGARSD RHAHIGLGHV
GAAGFARLVR DPRFAAHPMV LETHKGKDMA EDRRNLRVLR RLAAGDDPGK AACDVEGLKE
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