| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0697 |
|---|
| Symbol | |
|---|
| ID | 7172584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 844420 |
|---|
| End bp | 845118 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643539197 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002435122 |
|---|
| Protein GI | 218885801 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.10839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCC GGCCATTACT CGAAGTGCGC GACGTGAGCA TGGTTTTCGG CAGTGGAGAG
AATGCCCAGT ATGCCCTGCG CGACGTGGAC CTGGCCGTGC ATGACGGAGA GGTGCTGATG
CTGCGTGGTC CGTCGGGCAG TGGCAAGACG ACGTTGTTGT CCATAATGGG CGGCATTCTT
TCTCCCACAA GCGGCGAAGT GTTCGTTGAC GGGCATGCGA TGACGAAGCG GTCCACGGCA
GAGACATCCG CCCTGCGACT TCAGTACTTC GGTTTCATCT TTCAGGATTA CAACCTGTTC
CCGACGCTTT CCTGTTCGCA GAACATTCAG GTGGCTCTGG ACCTGCGTGG CATTGGCAGG
GGGGATGCGC GGCGGATCGC CGCCCAGACC CTGCAAGAGG TTGGCCTGGG GAACAAGCAG
GACGAGATGC CGGCCAAACT CAGCGGGGGC CAGAAGCAGC GTTTGGCGGT TGCGCGAGCC
CTGGCAGGGT CGCCCAAGGT GATGCTTGCC GACGAGCCGA CAGCGGCGCT TGATTCGGCG
AATGGCCTCA TGATCATGGC GCTGCTGCGC GACCTTGCAC ACGCGCGCGG TCGCGCCGTT
GTCGTGGTGA CCCACGATGA CCGTATCATG CCGTATGCCG ATCGGGTCGT GCACATCGAA
GATGGACGGA TAAAGGTCCC GGGGGGAGGT GCGCCATGA
|
|---|
| Protein sequence | MESRPLLEVR DVSMVFGSGE NAQYALRDVD LAVHDGEVLM LRGPSGSGKT TLLSIMGGIL
SPTSGEVFVD GHAMTKRSTA ETSALRLQYF GFIFQDYNLF PTLSCSQNIQ VALDLRGIGR
GDARRIAAQT LQEVGLGNKQ DEMPAKLSGG QKQRLAVARA LAGSPKVMLA DEPTAALDSA
NGLMIMALLR DLAHARGRAV VVVTHDDRIM PYADRVVHIE DGRIKVPGGG AP
|
|---|
| |