Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0696 |
Symbol | |
ID | 7172583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 843362 |
End bp | 844423 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539196 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002435121 |
Protein GI | 218885800 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.24713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCCA GGCTGGTTGT CTTTGCCGCG CTTGTCGGCG TGGCGTCGGT GCTCGCGTTT TCAAGGTCGG TACAGCCGCC GCTGAACGGG CTCATGCCGC GCACGTCCGC GGCGGCGGCC CTTGAGGAAC GGAAGCAGGG GTGGATAGTC GCCTCCGGAA GGGTCGAGCC GGTGACCAAG GAACTGGTGC TTGGCTTCGA GACCAGCGGG GTCATCGAAA CGCTGCACGT GGCCGAGGGT GACAAGGTCG AACAGGGGCA GTTGCTCGCC CGCCTTCGCA ACGAAGTGGA ACTGGCCCAG CTTGACGAGG CGCGCGCCAA TGCGCTTGCC GCACGAATGG AACTGGAGAA GCTGACCAAC GGGGCCAGGC CGGAGGAAAA GGGAGAGGCG CAGGCCAGGG AGCGCCGGGC GCTCAAGGTG TTCGAGCAGG CCCGGCAGGA AGCGGCGCGG CGTCAGCGGC TGCGTTTTCA GGACGCCATC TCCAGGGAGG ACATGGAACG TGCCCAGCGC GACATGGACG TGGCGAAGCA GGAGTACGAC GCCGCCTGGC AGCAGCTGAA GCTGGTCGAG GACATGTACC GGCGGGAAGA CGTGGCCAAG GCAGGACATC AGCTGGCCGC CGCCGAGGCA GCCGTCCGGG TGGCCGAGTC CACACTGCGC CGCATGGACC TGCGGTCTCC GGTGGCCGGA ACGGTGTTGA GGGTGTTCGG AGAGGCGGGC GAAGTCTTTT CGCTCTTCGC TCCCTCGCCC GTGATCAGCG TCGGTGACAT TGCGGCGCTC AACGTCAGGA CAGAAGTGGA TGAACGGGAC ATCGGCCGCG TACGGGTGGG GCAGGCCGCG TACGTGAGGG CCGATGCCTA TGGAAGTGAG AGGTTCGGCG GCAAGATAAG CCGCGTGGTG CTCAGCCTGA CGCCCAAGAC GCTGCGCACC GGCAACCCGT CGGAACCGGT GGACCGGAGT GTGCTTGAGG TGTTGATCAC GCTCGACGCG CCCGGCCCGC TCGTCAGTGG ATTGCGGGTG GATGCCTACA TCGATGCCTC GGCACTCCCC TTGCCGCAAT GA
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Protein sequence | MKPRLVVFAA LVGVASVLAF SRSVQPPLNG LMPRTSAAAA LEERKQGWIV ASGRVEPVTK ELVLGFETSG VIETLHVAEG DKVEQGQLLA RLRNEVELAQ LDEARANALA ARMELEKLTN GARPEEKGEA QARERRALKV FEQARQEAAR RQRLRFQDAI SREDMERAQR DMDVAKQEYD AAWQQLKLVE DMYRREDVAK AGHQLAAAEA AVRVAESTLR RMDLRSPVAG TVLRVFGEAG EVFSLFAPSP VISVGDIAAL NVRTEVDERD IGRVRVGQAA YVRADAYGSE RFGGKISRVV LSLTPKTLRT GNPSEPVDRS VLEVLITLDA PGPLVSGLRV DAYIDASALP LPQ
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