Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0654 |
Symbol | |
ID | 7172541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 787496 |
End bp | 789118 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643539154 |
Product | Amidohydrolase 3 |
Protein accession | YP_002435079 |
Protein GI | 218885758 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.214598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCG TGCGCCCGCC GCATCACAAT GCCGCGCAAG GCGGCGCGCG CCTGCTGGTC AACGCCCGCT TCCGCGATCC GCTGGCCCCG GCCACGTCGC GCGGCGCAGA TCTGCCCGAT GCCATGGCCG TGGAGGGCGG GCGCATCGTG GCCGTGGGCC GCGCGGCGGA ACTGGCTCCC TTCGCCGACC GGGGCTTCGT CCGCACCGAC ATGGGCGGGG CCACTGTGCT GCCCGGCTTC ATCGACTGCC ATTCGCACCT GCTGCTTACC GGCATCATGG ACCTAGGCAT GGACCTTTCC GTGGCGGAAA CCCTTGGCGA CGTGCTGGAC ATGGTGGCCG ACGCCGTCCG TAACGCGCCC TTCGGCGCCA TGGTCTACGG CTTCCGGCTG GAGGAACTGG ACCTTGCGGA GCGGCGCATG CCCACCAAGG CGGAACTGGA TTCCGTAGCG CCGGGCCGGG CCGTGCTGCT GATGCACGCC ACCTGCCACC GCTGCATCAT GAATACCCCG GCGCTGCGGC AACTGGCGGT GCCGCGCGGG CTGCCCGGCG CGGATACCGA AGGTGGGCGC GGCACCGCGC CCTTCACCGG CGTGGTGCGC GACCCCGGCA TTCTCACCTG GGTCTTTCCG GCCATCCTGC GCTCCATGGA CCGCCCCCAT CTGGACGCCG CCGCCCTGGT GGCCGCGCGG TCGGCCTTGC GGGTGGGCAT CACCACCGTG CATTCCATGG AAGGGGGAGA ACTGACCCCC GGCGGCTCGC CCGTGCTGCT GGACAACGCC ACGCGCCTGC CGCTGCGCGT GGTGTGCTGG AACCAGAGCA TGGACCTGGC CGAAGTGGAA CAGTTGGCCC TGCCCCGCGT GGGCGGGTGC ATCTGCGCCG ACGGCGAACT GGACGCCCGC ACCGCCGCGC TGTTCGAACC CTACAGTGAC GACCCCGGCA ACGACGGCAC CCTGCTGTAC TCCCAGCAGG AGATGGACGA CTTCGTGCTG TCCGCCCATG CGCGCGGATT GCAGGTGGCC GTGCACTGCG AATCCGAGCG GGCCATCGAT CAGGTGCTGC GGGCCATGGA ACGCGCCCAG CGGCTGGAGC CGCGCAGTGA CAGTCGCCAC CGCATCGAGC ACTTCGAACT GCCCACCTGG GACCAGATCG ACCGCATGGC CCGCGCCGGG GTGGTGGCGT CCATGCAGCC CGCCTTCGTG GAATCCTATT TCGGCGATGA CCGCATGGCC CATCTGGCAT CGCTGTTCGG GCCGCACCGC ATGCGCCGCC TGCACCCCTA CCGCGCCATC CTCGACGCCG GGGTGCGCGT GTGCGGCGGC TCCGACAGCC CGGTGACCAA CTACACCCCG CTGCGCGGCA TGGCCGCCGC CGTGAACCAC CCCTTTGCCG AACAGTCGGT GACCATGGCA GAGGCCCTGC GCATGTTCAC CACCGAGGCG GCGTTCTCGG CCTTCGAAGA GGCAGACAAG GGCCGCCTGC TGCCCGGCAT GCTGGCCGAC CTGGTGGTGC TGGGGCGTGA TCCGCTGGTT GATCGGAGCG GGCCGACGGA CATGGCTTCC GTTGCGGACA TCCCCGTGCT GGGCACCTGG GTGGACGGCC AGCCGGTAAC CCCGGAACCA TAA
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Protein sequence | MAAVRPPHHN AAQGGARLLV NARFRDPLAP ATSRGADLPD AMAVEGGRIV AVGRAAELAP FADRGFVRTD MGGATVLPGF IDCHSHLLLT GIMDLGMDLS VAETLGDVLD MVADAVRNAP FGAMVYGFRL EELDLAERRM PTKAELDSVA PGRAVLLMHA TCHRCIMNTP ALRQLAVPRG LPGADTEGGR GTAPFTGVVR DPGILTWVFP AILRSMDRPH LDAAALVAAR SALRVGITTV HSMEGGELTP GGSPVLLDNA TRLPLRVVCW NQSMDLAEVE QLALPRVGGC ICADGELDAR TAALFEPYSD DPGNDGTLLY SQQEMDDFVL SAHARGLQVA VHCESERAID QVLRAMERAQ RLEPRSDSRH RIEHFELPTW DQIDRMARAG VVASMQPAFV ESYFGDDRMA HLASLFGPHR MRRLHPYRAI LDAGVRVCGG SDSPVTNYTP LRGMAAAVNH PFAEQSVTMA EALRMFTTEA AFSAFEEADK GRLLPGMLAD LVVLGRDPLV DRSGPTDMAS VADIPVLGTW VDGQPVTPEP
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