| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0608 |
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| Symbol | |
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| ID | 7172495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 720022 |
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| End bp | 721605 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539108 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002435033 |
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| Protein GI | 218885712 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.0000979337 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCA TTACCGACGA CAAGCGCCTC CAGCCCTATC TCGGCACGCT CCAGAAGATC
GTGTCCGACA TGGGGCCGCA GCGACCATTT CAGTCCACCC TGAAGTCGCT GCTCCGCACG
CTGGCTGAAA ACCATGACTT CCAGCGGCCG CACATCGTCA TCTTCGACCC GGAGACCCGC
ACCCTCAAGC TCAGCCTGTC GCAGACGCCC ACCAAGGCGG ACCACGTGGA ATACGAGCCG
GGCGTGGGCG TGACGGGGCA GGTGTTCTCC ACGGGCCAGC CGGTCATCGT GCCGCGCATC
AAGGACCACC CGGCCTTCCT GAACAAGGCC TTTGGCCGTA CCGACGAAGA GCAGGAAAAC
CTGGCCTTCA TCTGCGTGCC GGTTCTGGGG CCCGCCGACG AACCCCGGCA GGGCCGCGAA
GTCATCGGCA CGCTGAGCGT GGACACCCCC TCGGTGTCCA TGCCGCAGCT GGAATCGCAC
TGCCGGTTCC TGGAGGTGGT GGCGGGCATG ATCGCCAACC ACGCCTCGTA CCTGCAGGAG
GAAATGGCCC GCCAGAAGCA TCTGATGACT CAGGGCCTCA TCGTGGGCGA CAGCAACGAC
ATCGGGTTCA CCCCGTCCAA CGTGGTTGCC GCGTCCAAGG CCATGAGACT GGTGCTGAAC
CAGGCGGCCC AGGTTGGCCC CAGCCGCGCC ACGGCGTTGC TGCGGGGAGA ATCGGGCACC
GGCAAGGAAC TGCTGGCGGA AGCCATCCAC CAGGCCAGCC CCCGGCGCGA GATGCCCCTG
ATCAAGCTGA ACTGCGCGGC GCTGCCCTCC GAACTGGTGG AAAGCGAACT GTTCGGCTAC
CAGAAGGGCG CCTTCACCGG GGCGGTGCAC ACCAAGAAGG GCCTGTTCGA ACTGGCCAAC
AAGGGCACCC TGTTCCTGGA CGAAGTGGGC GAACTGTCGC CCAACGCCCA GGCCAAGGTG
CTGCGCGCCA TCCAGGAGCA GGAAATCCAG CGCCTGGGCA GCGAACAGAC CATTACCGTG
GACGTGCGCC TGATCTGCGC CACCCACCAG CCGCTGGAGG AGCTTGTCGA GCGGGGGCTG
TTCCGTGAGG ACCTGTACTA CCGCATCAAC GTGTTCCCCA TCTTCATTCC GCCGCTGCGC
GAGCGGCGCG AAGACATCCT GCCGCTGGCA GAACACTTCC TGCGCATCTA TTCCGACGAG
TATGCGCGCA GCATCAAGCG CATCTCCACC CCGGCCATCG ACCTGCTGAC GCAGTACCAC
TGGCCCGGCA ACATCCGCGA ACTGAAGAAC TGCATCGAAC GCGCGGTGCT GGTGTGCGAC
GAACAGGTCA TCCGCACCTA CCACCTGCCG CCTTCGTTGC AGACGGCGGA ATCCACCGCC
ACGGACACCA ACCTCTCGTT CTGCGAGGCG GTGGCCAAGT TCGAGCAGGA ACTGCTGGTG
GACGCGCTGA AAAAGGCGCG CGGCAACATG TTGCAGGCCG CCCGCGACCT GCGCGTGAGC
TACCGCATCG TCAACTACAA GGTGAAGAAG TACGGCATCG ACGCCAAGAA GTTCGCCGTG
GCCAAGGCGC GCGGCATGAA ATAG
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| Protein sequence | MTTITDDKRL QPYLGTLQKI VSDMGPQRPF QSTLKSLLRT LAENHDFQRP HIVIFDPETR
TLKLSLSQTP TKADHVEYEP GVGVTGQVFS TGQPVIVPRI KDHPAFLNKA FGRTDEEQEN
LAFICVPVLG PADEPRQGRE VIGTLSVDTP SVSMPQLESH CRFLEVVAGM IANHASYLQE
EMARQKHLMT QGLIVGDSND IGFTPSNVVA ASKAMRLVLN QAAQVGPSRA TALLRGESGT
GKELLAEAIH QASPRREMPL IKLNCAALPS ELVESELFGY QKGAFTGAVH TKKGLFELAN
KGTLFLDEVG ELSPNAQAKV LRAIQEQEIQ RLGSEQTITV DVRLICATHQ PLEELVERGL
FREDLYYRIN VFPIFIPPLR ERREDILPLA EHFLRIYSDE YARSIKRIST PAIDLLTQYH
WPGNIRELKN CIERAVLVCD EQVIRTYHLP PSLQTAESTA TDTNLSFCEA VAKFEQELLV
DALKKARGNM LQAARDLRVS YRIVNYKVKK YGIDAKKFAV AKARGMK
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