| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0590 |
|---|
| Symbol | |
|---|
| ID | 7172477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 699737 |
|---|
| End bp | 702172 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643539090 |
|---|
| Product | ATP-dependent protease, putative |
|---|
| Protein accession | YP_002435015 |
|---|
| Protein GI | 218885694 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.0118699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG TTTCCCCGCT GCCCGCCGCC CGTCTTCGCG CCACGCTCGA CCCCACCCGC
ATCCGGTGGG AGACCAGCGA CGCCATTCCG CGCCCGCCGC GCAACGGCAT GCGCCGCACC
CCCCAGCCCC GCGTGTTGCA GGCGCTGGAA CTGGCCCTGC ACATCCGTGA CGGCGGCTAC
AACGTCTACC TTTCGGGCGA GGCCAATCTT GGCCGCACCT ACATGCTGCG CGAATACCTT
GCGCCGCGCG CCCGCAAGAT GGATACCCCG CCGGACCTCA TCCACGTCTA CAATTTCGAG
GACCCGGACA GGCCGCGCCT CATCGCGCTG CCCGCCGGGC AGGGGCGCAA GCTGCGCACC
GCCCTCACCC AGGCCCTGTC CAAGGCCCGC AAGGAAGCGC CCAGCCGCTT CGAGCACGAC
GCCTTCGTGC GCAAGCGCAC CCTGCTGCTG GACAAGTTCC AGACCCAGCG CAGCAAGCTG
TTCAAGGAAA TGGACACCGT GGCCGGGGGC GAAGGCTTCA ACCTGGACAT GGACGATTCC
GGCAGCCTGA CGCTGTACCC CATCGTGGAG GGCAAGCGCC TCAGCGAGGA CGAGTACGAA
AAGCTCGACG CCACGCTGCG CAAGAGCCTG AAGCTGAAGG GCGACCGCCT GCTGCAAGCC
ATGACCGGCC TGATGCGCAA GCTGACCCGC GCCGAACAGG ACTTCGTGGA GGACGAGCGC
ACCCTGGAAA AGGAAGTGGT GCGCGAGGTG CTGGACCAGT TCCTGACGCC GCTGGCGGAC
AAATTCGCCA AGACCTGTCC GTGCGACGAA CTGAAGCGCT ATTTCGCCGA CATGCGCGAA
GACATCCTGG ACAACATCGA AGGCTTCGTG CAGCGCGACA TGCCCACCCA CATGCCGCAG
CAGCAGCCCG ACCTGGGGCC GCCGCCCGAA GACACGTCCT TCCGCTACGA CATCAACGTG
TTCGTGGACA ACAGCGAAAC CCACGGCGCG CCCATCGTGG TGGACGACCA CCCCACCCCG
TCAAACCTGC TGGGGTGCAT TGAGCGCGAA TCGGAAATGG GCGCGCTGGT GACGGACTTC
ACCCTGGTCA AGGCGGGCTC GCTGCAAAAG GCCAACGGCG GCTTCCTGGT GCTGCACATG
GAGGACATCC TGTCCTACCC CAGCGCATGG GAAGGCTTGC TGCGCGCCCT GCGTTCGGGC
CTGGCCCGCA TAGAGGACGC GGGCGACGGA CAGGAATCCA CCAAGACCAA GGGCATAGAA
CCGGAACCGC TGCGCCTGAA CCTGAAGGTG GTGCTGGTGG GCACCGAGGA AATGTACGAG
ACGCTGCTGG TCAACGACGA CCGCTTCCCC AAGCTGTTCA AGATCAAGGC GCACCTGACC
GAGGCCACCG AACGCAACGC CGACGGGGTG AAGGTGTACC TTGCGCGCAT TGCGCGGATC
ATCGACGAGT CAAAGCTGCT GCCCTTCGAC CGCGACGCCA TGGCGGGGCT GGTGGACTAC
GGCTCGCGCA TCATAGAGGA CCAGCGCAAG CTGTCGCTGA AGTTCCCGGT GCTGCGCGAA
CTGATGATCG AGGCCTCGGC CCTGGCCTCC ATGAAGGGCA GCGCACTGGT GGACCGCACC
ACCCTGCACG ACGCCATGGT GGCGCGCACC TACCGCGCCA ACCTGGTCGA ACAGCACTAC
ATGGACGAAT ACGACCGCGA ACTGATCAAG GTGCGCACCA GCGGCAGCGA AGTGGGCCGG
GTGAACGGCC TTTCGGTGAC CTGGTACGGC GACTTCGAGT TCGGCCTGCC GCACCAGATT
TCCTGCACCG TGGGCGTGGG GCACGGGGGC ATCATCGACC TTGAGCGGGA AGCCGAGCTT
GGCGGGCCCA TCCACACCAA GGCCATGATG ATCCTGAAAA GCTACCTGGT CAGCCAGTTT
GCCCGCACCA AGCCGCTGGT GATGACCGGC AGCCTGTGCT TCGAGCAGAG CTACGCGGGC
ATCGAGGGCG ATTCCGCCTC CGGCGCGGAA CTGGCGGCCC TGCTTTCGGC CATCGCGGAT
GTGCCCATCC GGCTTTCGCT GGCCTTCACC GGCGCGGTCA GCCAGTCCGG CCAGATCATG
GCCGTGGGCG GCGTGACCCG CAAGGTGGAA GGGTTCTTCG AGGTGTGCAG CCGCCACGGG
CTGACCGGCG AACAGGGCGT TATCCTGCCC AAGGACAACA TCGCCCACCT GATGCTGAAG
CAGGAAGTGG TGGCCGCCGT GAACGAGGGA CGCTTTTCCA TCTGGCCGGT GGCGCACATC
ACAGAGGCCA TGGAACTGCT TACCGGCATG CCCGCCGGAC GCATGCGCGC CGATTCCACC
TTCAGTCCCG GCACCCTGTA CGACAAGGTG GACCGCCGCC TGGCCGAACT GGGCAGGCTG
GCCAAGGATG CCTTCAAGCA GAAGCGCAAG CGCTAG
|
|---|
| Protein sequence | MTKVSPLPAA RLRATLDPTR IRWETSDAIP RPPRNGMRRT PQPRVLQALE LALHIRDGGY
NVYLSGEANL GRTYMLREYL APRARKMDTP PDLIHVYNFE DPDRPRLIAL PAGQGRKLRT
ALTQALSKAR KEAPSRFEHD AFVRKRTLLL DKFQTQRSKL FKEMDTVAGG EGFNLDMDDS
GSLTLYPIVE GKRLSEDEYE KLDATLRKSL KLKGDRLLQA MTGLMRKLTR AEQDFVEDER
TLEKEVVREV LDQFLTPLAD KFAKTCPCDE LKRYFADMRE DILDNIEGFV QRDMPTHMPQ
QQPDLGPPPE DTSFRYDINV FVDNSETHGA PIVVDDHPTP SNLLGCIERE SEMGALVTDF
TLVKAGSLQK ANGGFLVLHM EDILSYPSAW EGLLRALRSG LARIEDAGDG QESTKTKGIE
PEPLRLNLKV VLVGTEEMYE TLLVNDDRFP KLFKIKAHLT EATERNADGV KVYLARIARI
IDESKLLPFD RDAMAGLVDY GSRIIEDQRK LSLKFPVLRE LMIEASALAS MKGSALVDRT
TLHDAMVART YRANLVEQHY MDEYDRELIK VRTSGSEVGR VNGLSVTWYG DFEFGLPHQI
SCTVGVGHGG IIDLEREAEL GGPIHTKAMM ILKSYLVSQF ARTKPLVMTG SLCFEQSYAG
IEGDSASGAE LAALLSAIAD VPIRLSLAFT GAVSQSGQIM AVGGVTRKVE GFFEVCSRHG
LTGEQGVILP KDNIAHLMLK QEVVAAVNEG RFSIWPVAHI TEAMELLTGM PAGRMRADST
FSPGTLYDKV DRRLAELGRL AKDAFKQKRK R
|
|---|
| |