Gene DvMF_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0542 
Symbol 
ID7172429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp638007 
End bp638408 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID643539042 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_002434967 
Protein GI218885646 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.0292946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGA CCAACGTGGC GTACGCCATG GGCGCGGGTC AGCCGGCGGG CGGCGGGGCC 
AACCCCATCG CTTCTTTCGT GCCGCTGATT CTCATGTTCG CCATTTTCTA CTTTCTCCTG
ATTCGTCCCC AGCAGAAGAA GGCCAAGGAA CACAAGGCCA TGCTGGAGTC CATCAAGAAG
GGCGACAACG TGGTGACCGC AGGCGGCATC TACGCCCGCG TGTTTGAAGT GCAGGATGAC
GTGCTGGTGC TCGACCTTGG CGAAACCAAG GTTCGCGTGG GCCGTTCCTT CGTCAGCGCG
GTCATCGACC CCAAGGCGAA GAAGGACGAC AAGAAGCCTG CCGACAAGAA GGCCGCCAAG
GACGCGGACA AGAAGGAAGA AGGGAAGGAC GGGCAGAAGT AG
 
Protein sequence
MLWTNVAYAM GAGQPAGGGA NPIASFVPLI LMFAIFYFLL IRPQQKKAKE HKAMLESIKK 
GDNVVTAGGI YARVFEVQDD VLVLDLGETK VRVGRSFVSA VIDPKAKKDD KKPADKKAAK
DADKKEEGKD GQK