| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0496 |
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| Symbol | |
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| ID | 7172383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 583728 |
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| End bp | 586181 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643538996 |
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| Product | Smr protein/MutS2 |
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| Protein accession | YP_002434921 |
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| Protein GI | 218885600 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.00013691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAATCCC GCAGCCTTCA GGTGCTGGAA TTCGGCAAGG TGCTCACGCA TCTTGCCGGA
TTGTGCGTTT CCGAAGCCGG CGCGGAGGCG GCCCTTGCCG TGCGCCCGCT GACCGGCATC
GACGCCGTGC ACCATGCCGC CGCCCTGTTC GACGAGGCGC GGCGCTGGGC CGGGCACACC
GGGTTCCGCC TTTCCTCCTT CCCCCCGCTG GACGGCGTGT TCCGCGCGCT GGACGCCCCG
GCCACGGTGC TGGACCTGGA CGCGCTGTGG GCCTTGCGCC AGACCCTGGG GCTGGCCCGC
AAACTGGCCG CGTCCATCCG CGAGGGCCAG TCCACCGGTG GCCGCTGGGA TCTGCTGGCC
GCCCTGGTGG ACAGCCACCC GCTGCCGCAG CGCACCGTGT CCGGCCTTGA CCGTTGCGTG
TCCGACGACG GGATGCTGCG CGACGAAAGT TCGCCCGAAC TTTCGCTGGT GCGCGGCGAA
ATCCGCCGCA TCCACCAGCA GTGCACCCGC AAGGTCAAGG AATACGCCCA GCGCTACAAC
ATCGCCCACT ACCTGCAGGA CGAGTTCATG ACCCTTTCGT CCGACCGGTA CGTGCTGCCC
CTGAAGTCCA ACTTCAAGGG CCGCCTGCAG GGCATCATCC ACGATTATTC GCAGACCGGC
GAAACCTGCT ACTTCGAGCC CATGTTCCTG GTGGAGCTGA ACAACGGCCT TCAGGAACTG
AAGCGCGAGG AACGCGAGGA AGAGCGCAAG GTGCTGCGCT ATCTCACCGA CCTCGTGCGC
GACGAACTGG CCTCCGTGCG CGGCGCCTAC GACCTGCTGG TGGAGGGCGA CGTGCTGTGC
GCGCGTTGCG CCCTGTCCGC CCGGTTCGAG GAATCCGGCG ATGCCGGGGC CGTTTCGGTC
ACCGAGGGCG GCCATGTTTC GCTGCTGGGC GCGCGCCATC CGCTGCTGGC CCTGTCCGTC
GCGCGCGGCG AAAAGGGCGG GGCGGCAGCC GCGCAGGCTG TGCCGTCTGC CTCCCGCGCC
CCGCACGCCA CGGGCAAGGG CAAGCCCGCC GCCGGGCATG GTGCGCAGCA TGGCCCGCAG
GCAGTGGACA TCGAACTGCT GCCCGGCCAG CTTGGCCTGG TCATCAGCGG CGGCAACGCG
GGCGGCAAGA CCGTGTGCCT GAAGACGCTG GGCCTCATCG CGCTGATGGG CCTGGCGGGG
CTGCCCGTGC CGGTGCGCCC CGGCAGTTCG CTGCCGTTCT GGTCCGACAT TTTCGCCTTC
ATCGGCGACG AGCAGAGCCT TGAGGACAAC GTGTCCACCT TCACCGCGCA GATCCGCCAC
CTGAGCGGCG TGTGGGACCG CCTTGGCCCC GGCGCGCTGG TGATTCTGGA CGAATTCGGC
GCGGGCACGG ACCCGGCGCA GGGCGCGGCC CTGGCCCAGG CCGTGCTGGA CGAGGTGATG
GACGCGGGCT CCACCGTGGT GGCCGCCACC CACTTCCCGG CGCTGAAGGC CTACGCCCTT
ACCCGTGACA AGGTGCGCGC CGCCTCGGTG CTGTTCGACC CCGTCACCAA GCGCCCGCTG
TTCCGCCTGG CCTACGATCA GGTGGGTGCC AGCCAGGCCC TGGACGTGGC CCGCGAGCAC
GGCCTGCCGG AAGCGGTGCT GCGCCGCGCC GAGCAGTACC TGCTGCTGGA CGGCGAGGAC
ACCAGCGCCC TTGTGGACCG CCTGAACACC CTGGCCGTGC AGCGCGAAGC GGAAATTTCC
TCGTTGCGGG CGGAAGAAGC CCGCCTGCGC GACAAGCGCA CCAAGCTTGA CGAGCGCTTC
GAGCGCGAGC GCCGCACCCT GTTCGAAACC GTGCAGGGAC AGGCCAAGAC CGTGCTCCAG
GAATGGAAGT CCGGCAAGGT CAGCCACAAG CAGGCCCTGA AGGCGCTGGC GGAAACCCGC
GCCCGGCTGG TTTCCGGCGC GGCGGGCAAC GGCGATGCCG ACGGCACGCC GGGATCCGCC
GACGCGACCC CGCCCGCGTT GCAGGTGGAA ACACTGCGCA CCGGGCAGGC CGTGCGCTAT
GTGCCGTGGG GCAAGAAGGG CACGGTGGTC GAGGTGGACG CCCGGCGCGG CAGGGTGCGC
GTGGACCTGA GCGGCGTGAC CATGTGGGCC GAGGCTAAAG ACCTGGCCGC ATTGGACGAA
AAGCCTCGTG TGGTCGTTGG CGCGGTGACC CGCACCATTT CGGACGCAAC CGCGTCCATG
AGGGTTGACT TGCGCGGCAT GCGTGCTGAT GTTGCCGTAA GCGAACTTTC ACGTGCGCTG
GACAAGGCCC TGCTCGCGGG CATGTCGGCT GTGGAGGCCA TCCACGGTCG CGGCACCGGG
GCCCTGCGCA AGGAAATCCA CGCGTTCCTG AAGTCATTCC CGGCCGTGCG GTCGTTTGCC
CTGGCCCCGG AAGACCAGGG CGGCGACGGC GTGACCATCA TCGAATTGAA GTAG
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| Protein sequence | MESRSLQVLE FGKVLTHLAG LCVSEAGAEA ALAVRPLTGI DAVHHAAALF DEARRWAGHT
GFRLSSFPPL DGVFRALDAP ATVLDLDALW ALRQTLGLAR KLAASIREGQ STGGRWDLLA
ALVDSHPLPQ RTVSGLDRCV SDDGMLRDES SPELSLVRGE IRRIHQQCTR KVKEYAQRYN
IAHYLQDEFM TLSSDRYVLP LKSNFKGRLQ GIIHDYSQTG ETCYFEPMFL VELNNGLQEL
KREEREEERK VLRYLTDLVR DELASVRGAY DLLVEGDVLC ARCALSARFE ESGDAGAVSV
TEGGHVSLLG ARHPLLALSV ARGEKGGAAA AQAVPSASRA PHATGKGKPA AGHGAQHGPQ
AVDIELLPGQ LGLVISGGNA GGKTVCLKTL GLIALMGLAG LPVPVRPGSS LPFWSDIFAF
IGDEQSLEDN VSTFTAQIRH LSGVWDRLGP GALVILDEFG AGTDPAQGAA LAQAVLDEVM
DAGSTVVAAT HFPALKAYAL TRDKVRAASV LFDPVTKRPL FRLAYDQVGA SQALDVAREH
GLPEAVLRRA EQYLLLDGED TSALVDRLNT LAVQREAEIS SLRAEEARLR DKRTKLDERF
ERERRTLFET VQGQAKTVLQ EWKSGKVSHK QALKALAETR ARLVSGAAGN GDADGTPGSA
DATPPALQVE TLRTGQAVRY VPWGKKGTVV EVDARRGRVR VDLSGVTMWA EAKDLAALDE
KPRVVVGAVT RTISDATASM RVDLRGMRAD VAVSELSRAL DKALLAGMSA VEAIHGRGTG
ALRKEIHAFL KSFPAVRSFA LAPEDQGGDG VTIIELK
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