| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0477 |
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| Symbol | |
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| ID | 7172363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 560337 |
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| End bp | 561761 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538976 |
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| Product | putative RNA polymerase, sigma 70 family subunit |
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| Protein accession | YP_002434902 |
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| Protein GI | 218885581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.0144971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CAGTGAAAAC GCCGCGCCGC GCCGCGCGCA CGCGCGGTGC CAAGGCCGCC
CAATCCGCCC AATCCGTCGG ACACGCAGGG GCGACCGGCG CCCTCTCCTC TGCCCCAGGA
TATTCCGAAG CACCCGAAGC GCCCGTCACG CCGGAAGTCG TGCTTGAGGC CGAGGTGCTT
CTGGATCAGC AGCCGGAAGT TGCCACCAGG GCCCGCGCCA AGGCGGGCTC CGGCAAATCC
TCTTCCGGCA AGGCCACTGC GGGCAAGGCC GCGCGGGGCC GCAAAGCCGC CTCCGCCCCC
GCTGGCGACG GCGACGAGGA CGCACCCGCC TCCGCCCCCC TGGCCGGCGA AGCCCCCGAC
GAAGCGGACG ACGATGAAAG TGCCGACGAC GAACTGGACA TCGACTTCGA CGGCCCCGGT
GACGACGCCA TCGACGTCGA CCTGCTGCAC GGCGACGACG ATTCGCCGCC TGCCCGGCAT
GACGCACATG ACGGGGCGGA CGCATCTGAC GAGAGCGCAG GCCGCCACCG TTCCCTGCCC
GTACTGCGCC CGGCCATGCC CGGCGCCTCC ACGCGCGACT CGCTGCACCT GTACCTGCGT
GAAATCAGCC GGTTTCCGCT GCTGAAGCCG GACGAGGAAT TCGACCTTGC CCGGCGCGTG
CAGGAACAGG GCGACAGCGA TGCCGCCTTC CGGCTGGTCA CCTCGCACCT GCGCCTGGTG
GTCAAGATCG CCATGGACTT CCAGCGGCGC TGGATGCAGA ATGTGCTGGA TCTGATTCAG
GAAGGCAACG TGGGCCTGAT GCGCGCGGTC AACAAATTCG ACCCGGAAAA GGGCATCAAG
TTCTCGTACT ACGCCGCCTT CTGGATCAAG GCCTACATCC TCAAGTTCAT CATGGACAAC
TGGAGGATGG TCAAGATCGG CACCACGCAG GCCCAGCGCA AGCTGTTCTA CAATCTCAAC
AAGGAACGCC AGCGCCTTAT CGCGCAGGGG TATGACCCCG ACGCCACCAT CCTGTCGGAA
AAGCTCAACG TGACCGTCGA GCAGGTCATA GAGATGGAGC AGCGGCTTGA TTCGTCCGAC
ATGTCGCTGG ACATCACCGT GGGCGAGGAT TCCGGCGGGG CTACCCGCAT GGACTTCCTG
CCCGCCCTGG GCCCCGGCAT AGAGGAAACG CTGGCCAACA GCGAAATCGC GCGCATGGTG
CAGGACAGGG TGCAGACCAT CCTGCCGAAG CTGTCGGACA AGGAGGCGTA CATCCTCCAG
CACCGCCTGC TTTCGGAACA GCCGGTCACC CTGCGCGAGA TCGGCGAGAA GTACGACATC
ACCCGGGAAC GCGTCCGCCA GATAGAAGCG CGCCTGCTGC AAAAGCTGCG CGACCATCTG
TTCAAGGAAA TCCGCGACTT CTCCTCGGAC TGGATATCAC AGTAG
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| Protein sequence | MTDTVKTPRR AARTRGAKAA QSAQSVGHAG ATGALSSAPG YSEAPEAPVT PEVVLEAEVL
LDQQPEVATR ARAKAGSGKS SSGKATAGKA ARGRKAASAP AGDGDEDAPA SAPLAGEAPD
EADDDESADD ELDIDFDGPG DDAIDVDLLH GDDDSPPARH DAHDGADASD ESAGRHRSLP
VLRPAMPGAS TRDSLHLYLR EISRFPLLKP DEEFDLARRV QEQGDSDAAF RLVTSHLRLV
VKIAMDFQRR WMQNVLDLIQ EGNVGLMRAV NKFDPEKGIK FSYYAAFWIK AYILKFIMDN
WRMVKIGTTQ AQRKLFYNLN KERQRLIAQG YDPDATILSE KLNVTVEQVI EMEQRLDSSD
MSLDITVGED SGGATRMDFL PALGPGIEET LANSEIARMV QDRVQTILPK LSDKEAYILQ
HRLLSEQPVT LREIGEKYDI TRERVRQIEA RLLQKLRDHL FKEIRDFSSD WISQ
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