Gene DvMF_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0388 
Symbol 
ID7172274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp456118 
End bp456942 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID643538887 
Producthypothetical protein 
Protein accessionYP_002434813 
Protein GI218885492 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.333934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTG CACCGATGAA GAGACTGCGG GCAATATTGC GCGGCGTGGC GCGGGGAATG 
TCGCGGGTGA TGCCGTGCGC GCTCCTGCTG TGCGTTGCCG CATCCGGGGC CAGTGCCGGT
CAGGCTGCCC CGCCTGTTTC CGTTCCGGCC AATTCCGCGC AGTCCGCCTC TGCCCCGTCC
GCCCTCACCC TGGCCACCAC CATATCCCCG CCGCTCAGCG AGCCCGGCCA AAACGGCATG
CTGGACCTGA TCATCAAGGC GGCCTTCGCG CGCATCGGGG CGGACGTATC CTTGCAGCAG
CTCCCCAGCG AGCGAGGGCT GGTCATGGCC GACAGCGGCC AGGTGGACGG CGACGGCAAC
CGCATCAGCG GATTGCAGGC CAGCTACCCC AACCTGCTCC AGGTGCCCGA AAGCAACATG
ACCTACGAGT TCACGGCCTT TACGCTGCGA CCGGACGTGA ACGTGCGCCA CTGGGACGAC
CTGCGCCACT ACACCGTCGG CTACATCATC GGCTGGAAAA TCTACGACGA GAACGTGCAC
GCCAGCAGTA CGGTAAAGGT GGCCACGCCG GAAAACCTGT TTGCGCTGCT GCGGGCCGGG
CGCGTGGATG TGGCGCTCTA CTACCGTCTT GGCGGCCTGT ACTACGCCCG CAAGCTGGGC
CTGACCAACC TGCGCGTGCT GGAGCCGCCC CTGGCCAGGC GCGAAATGTA CATGTACCTC
AACATCCGCC ATGCCGACCT GGTTCCCCGA CTGACAGATG CACTGCGCGG CATGAAGAAG
GACGGCAGCT ACGAGCGCAT CGTGGCCCCG TTCCTGAACC GTTGA
 
Protein sequence
MAFAPMKRLR AILRGVARGM SRVMPCALLL CVAASGASAG QAAPPVSVPA NSAQSASAPS 
ALTLATTISP PLSEPGQNGM LDLIIKAAFA RIGADVSLQQ LPSERGLVMA DSGQVDGDGN
RISGLQASYP NLLQVPESNM TYEFTAFTLR PDVNVRHWDD LRHYTVGYII GWKIYDENVH
ASSTVKVATP ENLFALLRAG RVDVALYYRL GGLYYARKLG LTNLRVLEPP LARREMYMYL
NIRHADLVPR LTDALRGMKK DGSYERIVAP FLNR