Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0388 |
Symbol | |
ID | 7172274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 456118 |
End bp | 456942 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643538887 |
Product | hypothetical protein |
Protein accession | YP_002434813 |
Protein GI | 218885492 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 0.333934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTG CACCGATGAA GAGACTGCGG GCAATATTGC GCGGCGTGGC GCGGGGAATG TCGCGGGTGA TGCCGTGCGC GCTCCTGCTG TGCGTTGCCG CATCCGGGGC CAGTGCCGGT CAGGCTGCCC CGCCTGTTTC CGTTCCGGCC AATTCCGCGC AGTCCGCCTC TGCCCCGTCC GCCCTCACCC TGGCCACCAC CATATCCCCG CCGCTCAGCG AGCCCGGCCA AAACGGCATG CTGGACCTGA TCATCAAGGC GGCCTTCGCG CGCATCGGGG CGGACGTATC CTTGCAGCAG CTCCCCAGCG AGCGAGGGCT GGTCATGGCC GACAGCGGCC AGGTGGACGG CGACGGCAAC CGCATCAGCG GATTGCAGGC CAGCTACCCC AACCTGCTCC AGGTGCCCGA AAGCAACATG ACCTACGAGT TCACGGCCTT TACGCTGCGA CCGGACGTGA ACGTGCGCCA CTGGGACGAC CTGCGCCACT ACACCGTCGG CTACATCATC GGCTGGAAAA TCTACGACGA GAACGTGCAC GCCAGCAGTA CGGTAAAGGT GGCCACGCCG GAAAACCTGT TTGCGCTGCT GCGGGCCGGG CGCGTGGATG TGGCGCTCTA CTACCGTCTT GGCGGCCTGT ACTACGCCCG CAAGCTGGGC CTGACCAACC TGCGCGTGCT GGAGCCGCCC CTGGCCAGGC GCGAAATGTA CATGTACCTC AACATCCGCC ATGCCGACCT GGTTCCCCGA CTGACAGATG CACTGCGCGG CATGAAGAAG GACGGCAGCT ACGAGCGCAT CGTGGCCCCG TTCCTGAACC GTTGA
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Protein sequence | MAFAPMKRLR AILRGVARGM SRVMPCALLL CVAASGASAG QAAPPVSVPA NSAQSASAPS ALTLATTISP PLSEPGQNGM LDLIIKAAFA RIGADVSLQQ LPSERGLVMA DSGQVDGDGN RISGLQASYP NLLQVPESNM TYEFTAFTLR PDVNVRHWDD LRHYTVGYII GWKIYDENVH ASSTVKVATP ENLFALLRAG RVDVALYYRL GGLYYARKLG LTNLRVLEPP LARREMYMYL NIRHADLVPR LTDALRGMKK DGSYERIVAP FLNR
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