| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0361 |
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| Symbol | |
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| ID | 7172245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 425474 |
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| End bp | 426643 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643538859 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_002434786 |
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| Protein GI | 218885465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.0125788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TCAAACTCGC GGACCGGCTG GCGACCCTGC CCCCGTACCT GTTTGCAGGC
ATCGACAAGG TCAAGGCCGA AGTGGCCGCC CGGGGCGTGG ACATCATCAG CCTCGGCATC
GGCGATCCCG ACATGCCGAC GCCCGACTTC ATCATCGAGG CCATGAAGAA GGCCGTGGAG
CGCCCCGCCA ACCACCAGTA CCCCTCGTAC GTGGGCATGC TGGAATTCCG GCAGGAAGTG
GCCAACTGGT ATGGCCGCCG CTTCGGCGTC AGCCTTGACC CCAAGACCGA GGTCATCGGC
CTCATCGGGT CCAAGGAAGG CATCGCCCAT TTCCCGCTGG CCTTCGTGAA CCCCGGCGAC
CTGGTGCTGG TGTGCACCCC CAACTACCCG GTGTACCACA TCGCCACCGG CTTCGTGGGC
GGCGAGGTGC AGTTCATTCC CCTGGTGGAG GAAAACGACT ACCTGCCCGA CCTCGACGCC
ATTCCCGCCG CCACCTGGGA CCGGGCGAAG ATGATCTTCG TCAACTACCC CAACAACCCC
ACGGCGGCCA CGGCCCCGCG CGCGTTCTAC GAAAAGCTCA TCGGCATCTG CCGCAAGCAC
AACGTGATCA TCGCGCACGA CACGGCCTAC ACCGAGGTCT ACTACGACGA GAATGACAAG
CCCATGAGCA TTCTTGAAGT GGAAGGCGCG AAGGACGTGA CCATCGAGTT CCACTCGCTG
TCCAAGACCT ACAACATGAC CGGCTGGCGC GTGGGCATGG CCGTGGGCAA TGCCTCTTTG
GTGGCGGGCC TTGGCAAGGT GAAGGAAAAC GTGGACTCCG GCATCTTCCA GGCCGTGCAG
GAAGCGTCCA TCGTGGCCCT GCGCGACGGC GACGACTTCT GCCGCGAACT GCGGGGCATC
TACCGCAAGC GCCGTGACGT GGTGGTGGCT GCCCTGAACA AGGTGGGCAT TGCCTGCCGC
GTACCCACCG CCGCGTTCTA CATCTGGGCC AAGGTGCCCG CCGGGTACGG CTCGTCCGCC
GAATTCGTCA CCGCCGTGCT GGAAAAGACC GGTGTGGTGC TGACCCCCGG CAATGGCTTC
GGCACGCCGG GCGAAGGCTA CTTCCGCATT TCGCTCACCG TGGATACCGA TCGCCTCGAG
GAGGCCGTGT CACGCATCGC GAACCTGTAA
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| Protein sequence | MADFKLADRL ATLPPYLFAG IDKVKAEVAA RGVDIISLGI GDPDMPTPDF IIEAMKKAVE
RPANHQYPSY VGMLEFRQEV ANWYGRRFGV SLDPKTEVIG LIGSKEGIAH FPLAFVNPGD
LVLVCTPNYP VYHIATGFVG GEVQFIPLVE ENDYLPDLDA IPAATWDRAK MIFVNYPNNP
TAATAPRAFY EKLIGICRKH NVIIAHDTAY TEVYYDENDK PMSILEVEGA KDVTIEFHSL
SKTYNMTGWR VGMAVGNASL VAGLGKVKEN VDSGIFQAVQ EASIVALRDG DDFCRELRGI
YRKRRDVVVA ALNKVGIACR VPTAAFYIWA KVPAGYGSSA EFVTAVLEKT GVVLTPGNGF
GTPGEGYFRI SLTVDTDRLE EAVSRIANL
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