| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0353 |
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| Symbol | |
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| ID | 7172237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 410826 |
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| End bp | 412076 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643538851 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002434778 |
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| Protein GI | 218885457 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.00862567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCACT TCCAGTACCG CGAAGGCCAA CTGTACGCCG AAGGCGTGCC GGTGCACGAA
CTGGCCAGCC GCTACGGCAC GCCGTTGTAC GTCTATTCGG CGGCCACCCT GCGCCGCCAT
TTCCAGGCCT TCGACAGCGC GTTCACAGGG GTCGGTCACC TGACCTGCTA TTCGGTCAAG
GCCAACTCCA ACGTGCATCT GCTACGCCTG CTGGCGGACA TGGGCGCGGG AATGGACATC
GTGTCCGGGG GCGAACTGCA CCGCGCGCTT GCCGCCGGGG TGCCCGGCCA GCGCATCGTG
TACAGCGGCG TGGGCAAGCA GGACGACGAA ATCCGCGCCG CCCTCGAGGC GGACATCCTG
CTGTTCAACG TCGAATCGGT GCAGGAACTG GAGCGCATCA ACGCCGTGGC CGGGCAGATG
GGCCGCACCG CGCGCATCGG CGTGCGCATC AACCCCGACG TGGACCCGAA GACCCACCCG
TACATATCCA CGGGCATGCG CAACAACAAG TTCGGGCTGG ACATGGAACA GGCCCTGGCG
GCCTACCTGC TGGCCCGCGA CCTGCCCAAC GTCCAGCCCG TGGGCATCGA CTGCCACATC
GGTTCGCAGC TCACCACGCT GGCGCCGTTC CTGGAGGCGC TGGACCGGGT GCTGGACTTC
CACGAACGAC TGCGCGACCT CGGGCTTGCC ATCACTCATC TGGACCTTGG CGGCGGGCTC
GGCATCACCT ACGGCGAAGA AACCCCGCCC CACCCCAGGG AGTTCGGCGA GGCGGTGTCC
GAACGACTGC GCGGGCGCGG GCTGTCGCTG ATCCTGGAAC CGGGCCGGGT CATCGCGGGC
AACGCGGGCA TTCTGGTGGG CCGGGTGATC TACACCAAGT CCACTCCCAG CAAGAACTTC
ATCATCGCGG ACGCGGCCAT GAACGACCTT GTCCGCCCTT CGCTGTACCA GTCATACCAT
CGCATCGCAG AGGTGCAGCC CGCCGGGCGC GACGAGATCA CCGCCGATGT GGTGGGCCCC
ATCTGCGAAT CGGGCGACTT TCTGGCGCGC GACCGCATCC TGCCGGACAT GCAGCAGGGC
GAACTTCTGG CTGTCTTCTC GGCCGGGGCG TACGGCTTCT CCATGAGCTC CAACTACAAC
TCGCGCCCCC GCGCGGCAGA GGTGCTGGTG GACGGCGCAA CGGCGCGGTG CATCCGCAAG
CGCGAAACCC TGGCGGACCT GGTGGCACCA GAGCTGAACG CAGAGGGGTG A
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| Protein sequence | MHHFQYREGQ LYAEGVPVHE LASRYGTPLY VYSAATLRRH FQAFDSAFTG VGHLTCYSVK
ANSNVHLLRL LADMGAGMDI VSGGELHRAL AAGVPGQRIV YSGVGKQDDE IRAALEADIL
LFNVESVQEL ERINAVAGQM GRTARIGVRI NPDVDPKTHP YISTGMRNNK FGLDMEQALA
AYLLARDLPN VQPVGIDCHI GSQLTTLAPF LEALDRVLDF HERLRDLGLA ITHLDLGGGL
GITYGEETPP HPREFGEAVS ERLRGRGLSL ILEPGRVIAG NAGILVGRVI YTKSTPSKNF
IIADAAMNDL VRPSLYQSYH RIAEVQPAGR DEITADVVGP ICESGDFLAR DRILPDMQQG
ELLAVFSAGA YGFSMSSNYN SRPRAAEVLV DGATARCIRK RETLADLVAP ELNAEG
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