| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0312 |
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| Symbol | |
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| ID | 7172194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 360067 |
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| End bp | 362688 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538808 |
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| Product | peptidase S16 lon domain protein |
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| Protein accession | YP_002434737 |
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| Protein GI | 218885416 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.345035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC CCAAGAAGGC GACCAAACGC ACCGCTGCCT CTGCCGCATC TTCGACTTCG
TCCGCACACG CGCCCTCTGC CGCGTCTTCT TCCGCGTCCG TGCCGGGCGG CGGGGCGCTG
CCCGCACCGC TTGCGCCCGA ACAGCTGCGC TGGACGCTGG ACCCCGCAAC GCTGCCCTTT
GCCCATACCG GCGAGGTGGA TGAGCAGGCC GACATCATCG GGCAACGGCG GGGGGTGGAT
GCCTTTCGTT TCGGCATGGG CATGCATGGC AAGGGCTACA ACATCTTCGT CACCGGGGCC
GTGGGCATCG GCAAGCTGTC CATGGTCAAG CGGCTGCTGG GCAACGGCGC CAACGGAGCG
GCCACGCCCG ACGACCTGTG CTTCGTGAAC AACTTCAAGA CGCCGGAAGA ACCCATCCTG
CTGCGCTTTC CCGCGGGCAA GGGCCGCGCC TTCAAGGCCG ACGTGCAGGC GTTCCTGGAC
ACGGTGAAGC GCGACATTCC GCAACTGTTC GAAAGCCAGG AATACATCGC CAGCAAGAAC
GAGATCATCG AGGCGCACGA CAGGAAGACC CGCGAGTTCT TCAAGAACCT CGAAACCAAG
GTGCGCGATT CCGGCTTTGT GCTGGTGAAC ATGCAAATGG GCCAGATCCA GCGGCCCGAC
ATCGTGCCCA TCGTGGACGG CGAGCCGGTG CACCTGCTGA AGCTGGAGGA AATGGCCGCC
AAGGGGCGCT TTCCGCGCGA GGAGCTGGAA AAGCTTCAGG AAACCTACAA GACTCTGAAG
GAAGAGATCG ACGCCATCTT CCTGGACGTG CGCGAACTGC AAAAGGAAGT GAAGCGCAAG
ACCGAAGAGG TGGACCGGCT CATGTTCATG AGTTCGGCGC GCGATCTGGC CCGCCCGCTG
CTGGAAGGCT ACACCGACCC CAAGGTGCAG AAGCATGTGG AGGCGGTGCT GGCCGACATG
GCAGAAAACC TGGACGGCCT GAAGGTGATG GGCCAGCAGG TGCAGGGGCC CATGGGCATG
TTCGTGCCCG CCCCGGCGGA AGCGGTGCTG CACCCCTACC AGGTCAACCT GCTGGTGGAC
AACGCCGAGC TGGAAGGCCC GCCGGTGATC GTGGAATCGT TCCCCAACTA CCGCAACCTG
TTCGGGTCCA TCGAGCGGGT CATGGACCGT TCCGGCCTGT GGCGCACCGA CTTCACCAAG
ATCAACGCCG GTTCGTTCGT CAAGGCCAAC GGCGGGTATC TGGTGCTGAA CCTGATGGAC
GCCATCATGG AACCGGGGGT GTGGCAGACC CTCAAGCGCG CCCTGAAGAC GTCGGAAATA
GAGATCCAGA CCTTCGATCC TTACTACTTC ATCACCGCCA CGGGCATTAA GCCGGAATCC
ATCAGCATGG AGGTGAAGGT GGTGGTCATG GCCACGCCGC AGCTGTACCA CATGCTGCGC
CACTACGACC CGGACGTGCA GAAGATCTTC AAGGTGTGGG CGGACTTCGA TTCGTCCATG
CCGCTGGACG AGGCGTGCGT CACCGAGGTG GCCAAGCTGA TGAAGACCTT CGTGGCGGCG
CGCAACCTGC GCCAGTTCGA CGCCACCGCC GTGGCCGCCC TGCTGGAGCA CGGCGTGCGC
ATGACCGGGC GGCGCGAAAA GCTGACCACC TCGTTCCCGG TGCTGCGCGA CATCATGGAG
GAAGCCGACT ACATCGCCCG CGAGTCCGGG GCGGACATGG TTACCGCCGC ACACGTGACC
CAGGCGGTGG AAGGGCGGCA GTACCGCGCC GGGCTCATCG AGGAGAAGGT GCAGGAGATG
ATCGACCGGG GCAGCGTGTT CATCGACACC GACGGCGAGG TCGTCGGGCA GGTGAACGGG
CTGGCCGTGT ACGCCATGGG CGACCACATG TTCGGCAAGC CTTCGCGCAT CACCGCCACC
ACCTCCATGG GGCGCGAGGG CATCATCAAC ATCGAACGCG AATCGGACCT GTCCGGGGCC
ATCCACAACA AGGGCATGCT CATCCTTTCG GGCTACCTGC GCCGGGCCTT CGCCCAGGAC
AAGCCGCTGA CCCTGGCGGC ATCCATCGCC TTCGAGCAGT CCTACGGCGG GGTGGACGGC
GACTCGGCCT CGTCCACCGA GCTGTACGCG CTGCTCTCCA GCCTTTCGGG CGTGCCCATC
CGGCAGGGCA TTGCCGTCAC CGGTTCGGTG AACCAGAAGG GCGAGGTGCA GCCCATCGGC
GGCGTGAACG AGAAGATCGA AGGCTTCCAC GAGGTGTGCA GGCGCAAGGG GCTGACCGGC
GGTCAGGGGG TGCTGATACC CGCCGCCAAC GTCAACGACC TGATGCTGAA GCCGGAAGTG
CTGGATTCGG TCCGCGCGGG CACCTTCCGC ATCTGGGCCG TGCGCACGGT GGACGAGGGC
ATCGAACTGC TGACCGGCGT GCCCGCCGGG GTGCGCGGCG CGGACGGCAA CTACCCGCCC
GATACCGTGT ACGGCAAGGT GGATGCGCGG CTGCGCGAAC TGGCCGAGGG GCTGCGCAGC
TTCGGCGAAA AGAAGGATGA GAACGGCAAC GGGAAGGAGA AGGGCAAGCG CGCCAAACCT
TCCAGGGGGC CGAACAAGGA TCCTGAAGAC AGGAAGAAAT AG
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| Protein sequence | MTTPKKATKR TAASAASSTS SAHAPSAASS SASVPGGGAL PAPLAPEQLR WTLDPATLPF
AHTGEVDEQA DIIGQRRGVD AFRFGMGMHG KGYNIFVTGA VGIGKLSMVK RLLGNGANGA
ATPDDLCFVN NFKTPEEPIL LRFPAGKGRA FKADVQAFLD TVKRDIPQLF ESQEYIASKN
EIIEAHDRKT REFFKNLETK VRDSGFVLVN MQMGQIQRPD IVPIVDGEPV HLLKLEEMAA
KGRFPREELE KLQETYKTLK EEIDAIFLDV RELQKEVKRK TEEVDRLMFM SSARDLARPL
LEGYTDPKVQ KHVEAVLADM AENLDGLKVM GQQVQGPMGM FVPAPAEAVL HPYQVNLLVD
NAELEGPPVI VESFPNYRNL FGSIERVMDR SGLWRTDFTK INAGSFVKAN GGYLVLNLMD
AIMEPGVWQT LKRALKTSEI EIQTFDPYYF ITATGIKPES ISMEVKVVVM ATPQLYHMLR
HYDPDVQKIF KVWADFDSSM PLDEACVTEV AKLMKTFVAA RNLRQFDATA VAALLEHGVR
MTGRREKLTT SFPVLRDIME EADYIARESG ADMVTAAHVT QAVEGRQYRA GLIEEKVQEM
IDRGSVFIDT DGEVVGQVNG LAVYAMGDHM FGKPSRITAT TSMGREGIIN IERESDLSGA
IHNKGMLILS GYLRRAFAQD KPLTLAASIA FEQSYGGVDG DSASSTELYA LLSSLSGVPI
RQGIAVTGSV NQKGEVQPIG GVNEKIEGFH EVCRRKGLTG GQGVLIPAAN VNDLMLKPEV
LDSVRAGTFR IWAVRTVDEG IELLTGVPAG VRGADGNYPP DTVYGKVDAR LRELAEGLRS
FGEKKDENGN GKEKGKRAKP SRGPNKDPED RKK
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