| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0257 |
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| Symbol | |
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| ID | 7172137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 293621 |
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| End bp | 294940 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643538752 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002434682 |
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| Protein GI | 218885361 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.00720402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGCAT GGGCCATTGT TCTCGCGGCG GGCAGCGGCA CCCGGCTTGC GGCAGCCGGG
CTGTCCACGG CCAAGCAGTT CATCCAGCAC CGGGGGGCGC CGTTGTACTG GCGTTCGGCG
CGCACGTTCG CGGCGGTGGC GCGGGTGCGC GGGCTGGTCT TCGTGTTTCC GCAGGACAGG
CTGGAGGCCG AGCGCGAGCG ATTGACCGTG CTGGACGCCG GGCGCGCCCT GGGCGTGCCG
TGGCGGGCGG TGGCGGGCGG CGCGCTGCGG CAGGATTCGG TGGCGGCGGG GCTTGCGTCC
CTGCCGCGCG AGTGCGACGC GGTGCTGGTG CATGACGCGG CCCGGCCATT CGCCACGGCG
GCGCTGTGCA ACGCGGTGCT CGACGCGCTG GCGGCGGGCG CGCCGGGGGT GGTGCCGGGA
GTGGCGGTGA CGGACACCAT CAAGCAGACG GCCAACGGCG TGGTTGCCCA CACCCCGGAC
AGATCCGGGC TGGTGGCGGT GCAGACCCCG CAGGGCTTCG CGCTGGCCGC GCTGCGACAG
GCGCATGAAC GCGCCCGCGC CGAGGGCTGG ACCGTCACCG ACGATGCCGC CCTGCTGGAA
CGCTGCGACG TTGCCGTGCA CGTGGTGCCC GGCGAGGTCG CCAACGCCAA GATCACCACG
CCGGAGGACC TGGCCATGCT GGACGATGCC GCCACCGCCC GTACCCCGTG GGATGTCCGC
AACGGGCAGT CCCGCCTGAT CCCCTGCACC GGCTGGGGCT ACGACGTGCA CCGCTACGTG
CGGAAGGAAG AGGCGGGCCG CCCCATGAAG CTGGGCGGCG TGCTCATTCC CGGCGGCCCG
GAGGTGGTGG CCCATTCCGA CGGCGACGTG CTGCTGCACG CCCTCACCGA TGCCCTGCTG
GGGTGCATCG GCGGCGGCGA CATCGGCCAG CATTTTCCGG ATACCGACGC CGCGCTGGAC
AACGCCAACT CCGCCGTCCT GCTGGACGAG GTGCTGGGCC TGACCCGCGC CGCCGGGCTG
GAAATCACCA ACGTGGACCT GACCATCATC GCCCAGGTAC CCCGGCTGGC CCCGTGGCGC
GAACATATCC GCCGCAACAT CTGCCGCCTG TTGGCTCTGG ACGAGGCCAT GGTGAACGTG
AAGGCCACCA CCGAAGAAAA GCTGGGCTTC ACCGGCGAAA AGAAGGGCCT GAAGGCCGTG
GCCGCCGTGA CCGGCCTGCG CCCCGTGCGG GCTGGCCGCC CCGGTGATGC AGGCGAAGCC
GCGGACACAG GCGGCACAGG CGGCCCAGCC GTCAGCACAG GCGGAACAGG CGGCGCCTGA
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| Protein sequence | MHAWAIVLAA GSGTRLAAAG LSTAKQFIQH RGAPLYWRSA RTFAAVARVR GLVFVFPQDR
LEAERERLTV LDAGRALGVP WRAVAGGALR QDSVAAGLAS LPRECDAVLV HDAARPFATA
ALCNAVLDAL AAGAPGVVPG VAVTDTIKQT ANGVVAHTPD RSGLVAVQTP QGFALAALRQ
AHERARAEGW TVTDDAALLE RCDVAVHVVP GEVANAKITT PEDLAMLDDA ATARTPWDVR
NGQSRLIPCT GWGYDVHRYV RKEEAGRPMK LGGVLIPGGP EVVAHSDGDV LLHALTDALL
GCIGGGDIGQ HFPDTDAALD NANSAVLLDE VLGLTRAAGL EITNVDLTII AQVPRLAPWR
EHIRRNICRL LALDEAMVNV KATTEEKLGF TGEKKGLKAV AAVTGLRPVR AGRPGDAGEA
ADTGGTGGPA VSTGGTGGA
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