| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0256 |
|---|
| Symbol | |
|---|
| ID | 7172136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 291552 |
|---|
| End bp | 293303 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643538751 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002434681 |
|---|
| Protein GI | 218885360 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.0139167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CCAACACCTC CGCCGATTTC CCCTGGCTGG CCAGCTACGA TGCGGGCGTT
CCCGCGAACA TCAGCTACGA AACCTTTCCG CTGTTCACCC TGCTGGACAG GGCCGCGGAA
CGCACCCCCC GCCGCACGGC CATCGCCTTC CGCAACTATC GCATCAGCTA CGCCAAACTG
CGCCAACTGG CGGAGGTCAT GGCCGCCAAC CTGCGCGCCC AGGGCGTGCG GCGCGGCGAC
AAGGTGTCGA TCATGCTGCC CAACCTGCCG CAGACGGTCA TTGCCTTCTG GGCGGTGCTG
AAGGCGGGCG GCGTGGTGGT GATGACCAAC CCGCTGTACA TGGAAAAGGA ACTGGTCCAC
CAGATCCACG ACTCCGGCGC GCGGTTCATG ATCGCCCTCG ACCTGGTGTG GCCCAAGATA
GAGCCGCTGC GCGAAAAGCT GGGCATCGAC AAGTATTTCC TCACCCGCAT CGGCGACGGG
TTGGCCTTTC CGCTCAACTT CCTGTACGCC TTCAAGGCCA AGCGCGAAGG CACCTGGCGC
GAGCTGCCCT TTGACGGCAG GCACGTGCTG CCGTGGAAAA CCCTGCTCAA GGGCAAGGTC
CGCCATTCCA CCACCACGTG CAACCCCACG GAAGACCTGG CCGTGCTGCA ATACACCGGC
GGCACCACAG GCATTTCCAA GGGGGTCATG CTGACGCACC ACAACATGTC GGTGAACGTG
CAGCAGATCA CCACCATTTT GGGCGACGCC CGCGACATGG ACCACTGTTT CCTGGGGCTG
ATGCCCTACT TCCATGTCTA CGGGCTGACC ACCTGCCTCA CCCTGCCCAC GGCTCTTGCG
GCCACCATCG TGCCCTTCCC GCGCTATGTC CCGCGCGACG TGCTGGTGGG CATCCAGAAG
CACAAGCCCA CCATCTTCCC CGGCGCGCCC TCCATCTACA TCTCGCTGAT GCAGCAGAAG
GAGGTGGGCG ACTACGACCT GACCTCCATC CGCTACTGCA TTTCGGGGTC GGCACCCATG
CCGGTGGAGC ACATCAAGCG GTTCAGAGAG CTTACCGGCG CGCAGGTCAT CGAGGGCTTC
GGCCTGACGG AGGCCTCGCC GGTCACCCAC CTGAACCCCA TCCACGGGGT CAGCAAGACC
GGGTCCATCG GCATCCCCTT TCCGGACACC GAGGCGCGCA TCGTGGACAT GGAGGTGGGC
CAGGTGCCGC TGCCCGCAGG CAAGGTGGGC GAACTGATCA TTCGCGGCCC GCAGGTCATG
AAGGGCTACT GGAATCGCCC GGACGAAACC GCCAACACCC TGCGCAACGG CTGGCTGTAC
ACCGGCGACA TCGCCATCAT GGACGAGGAC GGCTACTTCA CCATCGTGGA CCGCAAGAAG
GACATGTTCC TGGTGGGCGG CTACAATGTC TACCCGCGCG AGATCGACGA GGTGCTGCAC
GAGCACCCCA AGATCAAGGA AGCGGTGACC GTGGGCGTAC CCCACCCCAC GCGCGGCGAG
ATGATCAAGG CCTTCGTGGT GGTAAAGCCC GGCGAAAAGC TGACCAAGGC CGAGGTCGTG
GCCCACTGCC GCGAAAAGCT GGCCAGCTAC AAGGTGCCCA AGCAGGTGGA ATTTCGCGAC
GACCTGCCCA AGACCGTGGT GGGCAAGGTA CTGCGCCGCA TCCTGCGCAC CGAGGAAGAA
GAGAAGCTGA AGGCGGAACT GGCCGCGTCT CCCGCAACAG CCGCCGCGTC CGACGACGAC
GGAGCGCAGT AG
|
|---|
| Protein sequence | MTEPNTSADF PWLASYDAGV PANISYETFP LFTLLDRAAE RTPRRTAIAF RNYRISYAKL
RQLAEVMAAN LRAQGVRRGD KVSIMLPNLP QTVIAFWAVL KAGGVVVMTN PLYMEKELVH
QIHDSGARFM IALDLVWPKI EPLREKLGID KYFLTRIGDG LAFPLNFLYA FKAKREGTWR
ELPFDGRHVL PWKTLLKGKV RHSTTTCNPT EDLAVLQYTG GTTGISKGVM LTHHNMSVNV
QQITTILGDA RDMDHCFLGL MPYFHVYGLT TCLTLPTALA ATIVPFPRYV PRDVLVGIQK
HKPTIFPGAP SIYISLMQQK EVGDYDLTSI RYCISGSAPM PVEHIKRFRE LTGAQVIEGF
GLTEASPVTH LNPIHGVSKT GSIGIPFPDT EARIVDMEVG QVPLPAGKVG ELIIRGPQVM
KGYWNRPDET ANTLRNGWLY TGDIAIMDED GYFTIVDRKK DMFLVGGYNV YPREIDEVLH
EHPKIKEAVT VGVPHPTRGE MIKAFVVVKP GEKLTKAEVV AHCREKLASY KVPKQVEFRD
DLPKTVVGKV LRRILRTEEE EKLKAELAAS PATAAASDDD GAQ
|
|---|
| |