| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0254 |
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| Symbol | |
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| ID | 7172134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 289325 |
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| End bp | 290917 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643538749 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_002434679 |
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| Protein GI | 218885358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.00196419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGGCGG ATGACATCAC CCTTCTCATC GCCGCGCCCT CGCCGCTGAC GCGCGAGGCG
CTGCGCCGCC TGCCCGGCAC GGGCCGCACC ATGCTGCGCG CCGCCACCCT GGCCGAGGCG
CTGGCCATGC ACGACGCGCG CCGCCCCCAC GTGGTGATCA TCGACGCCGC CCTGCCCGAC
GCCGCCCCAA CATATCCTGC CCAGACATAT CCGGCCCGGA CATATCCGGC CCGGCCCGAT
GCGGCGCCTG TCCCCCTGCG TCTTGCCGCG CCCCCGCCGC CGCCCTACGA CCCCGTGCCG
CCCCCGTCCG TACCCGCATC GGCCTCCGCA TCGGCCTCCG CTTCGGCGTC CGTATCGACA
CAGGGCGAGC ATGCGGGCGG CCACCGTCCC GTGCTCGACC TGCTGCGGGC CATCCGCGCC
GTGCGCGGCG ACGAGGACGT GTTCCTCATC GTGCTCACCG AGCCGGACGA CCACACCTTG
CGGGCCGACG CCCTGGCCAT GGGCGCCAAC GACGCCCTGC GCCTGCCGCT GGAACCGCTG
GAACTCGACG CCCGCGTGTC CGTAGGCGCC CGGCAGGCCC GCATGGCCCG CCGCCTGCGC
GCCTACTCGG ACAGGCTGAC CCGCGAAATG GCACGCGTGG CAGAATTGCA GATGCGCCTG
CTGCCTTCGT CCTCGCCGTA TCTGCCCGGC CTGCACGTGG AAAGCCTGTA CCGCCCATCC
GGCGATGCCA GCGGCGACTA TTTCGACTAC TTCCTGCTGC CCCCGCGCGT CCCCGCCAAT
GCCGCGCCCA CGGCATCCCC GGCGCAGCAT GCTTCGTCCG CCGTGCCAGA CCAGCCCGCC
GTGCCTGCAA AGCCCGCCCC GCCTGCGCAG CCTGCCCGAT CCGACGCCGA CGGCCCGGTG
CTGCGGGTGG TCATTGCCGA CGTGTCCGGC CACGGAGCCC GCGCCGCCTT TCTCATGAGC
ATCGTGCGCA CGCTGGTGCG CGCCCAGAAC GACGGCGCCG CCGCCCGCCA CGCCGACGGC
ATGCCCCCTC TGCCGCTAAC GGAGACCGTA CGGCGCATCA ACCGGCACCT GGTGGACATC
ATCGGCGGCG AGCCGGACTT CGTCACCCTG TTCGCGGGCG ACATCGACTT TGCCGCAGGC
ACGCTGGAAT ACGTCAACGC CGGGCATTGC CCCGCCCTGC TTCGTGGGGG CAACGGGCAG
ATCACCCGCC TGCCTTCCAA CGCGCCGCTG CTGGGATTCT TCAACGCCGA TTTCGCCGCA
GAACTGCGCG CCTTTCCGCC CGGCTGTCAG TTGCTGCTGT TCACCGACGG CCTGCATGAC
TGGACGGCAC CCGGCGGCAC CCACCTTGGC TCGGAACGGT TTCTGGAGCT GACCGAACCA
TGCCTGCGCG CCGGCAGCGA GGTGCTGGCC GCCATGGAAT CGGCCCTGCG TGATGTGGCT
GGCGGCATGC CGCCCTTCCG GGACGACGTG ACCGCCCTGT GGATACGCCG CGACGGCCCC
ATCGTGGACG CACTGGTCAG GCCAGACGGG CCAGACGGGC CAGACGGGCC AGACGAGTTT
GCCAGGCCGG GCGAACCCGC CAAGGCCCAT TGA
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| Protein sequence | MAADDITLLI AAPSPLTREA LRRLPGTGRT MLRAATLAEA LAMHDARRPH VVIIDAALPD
AAPTYPAQTY PARTYPARPD AAPVPLRLAA PPPPPYDPVP PPSVPASASA SASASASVST
QGEHAGGHRP VLDLLRAIRA VRGDEDVFLI VLTEPDDHTL RADALAMGAN DALRLPLEPL
ELDARVSVGA RQARMARRLR AYSDRLTREM ARVAELQMRL LPSSSPYLPG LHVESLYRPS
GDASGDYFDY FLLPPRVPAN AAPTASPAQH ASSAVPDQPA VPAKPAPPAQ PARSDADGPV
LRVVIADVSG HGARAAFLMS IVRTLVRAQN DGAAARHADG MPPLPLTETV RRINRHLVDI
IGGEPDFVTL FAGDIDFAAG TLEYVNAGHC PALLRGGNGQ ITRLPSNAPL LGFFNADFAA
ELRAFPPGCQ LLLFTDGLHD WTAPGGTHLG SERFLELTEP CLRAGSEVLA AMESALRDVA
GGMPPFRDDV TALWIRRDGP IVDALVRPDG PDGPDGPDEF ARPGEPAKAH
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