| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0210 |
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| Symbol | |
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| ID | 7172090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 230566 |
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| End bp | 232344 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643538708 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002434638 |
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| Protein GI | 218885317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.019468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAAGG CGCAAGCCGG GTTGACCTAT CAACAGTTCT GTGTGGCCGT GACGTGCACG
GTTCTTCTGC TGTTGGCCGC GTGGCCGGAT TCCGCGGCCC GGGCGGAGCG GGAGATGGCA
CAGGGTGCCT TCGCCTCCGG ACCGACCTGT GGCCCGACAG GCAACCCGAT CGGACCTTCG
TTCACCAATC CCGCCCATCC CGCCCCTTCC GCGCCTGCCC CTGATTTCCA GAATGCCGAG
GCAGGAACGG GCCTTGCCAT CCCCGCTGCC GTCCCCGCTG CCGTCAGGGC CACCGCATCC
GGCGGTCCTT CCCGCATTGC CGCCACCCGG ACGCCGGGCT TCCCCACCGG TAGTCTGGTT
GCCCAGGATT CCCGCGCTGC CGGGGTGCCC GCCACCGCCG CCGCCCCTTT CGCTTACACG
GGTGAGACCG TAGCACCTGC CGACGTGCCT TCCGGTGTTC CTTCCGGTTC GAACCAGCCC
CGTTCGGCGG CTGTCAGTCC CGCAGATGCC AAACCGTCAG CGGACAGTCC GGCAGGGGGC
GAACTGGCCC CCGGCGAACC GGTGCGCCTG GGCATGTCCG CTCCCTTCAG CGGTCCCGGC
GTGTCGCTGG GGCGCGAATT CCATCGCGGC GCGGCCAGTT GCCTGGCCCG GGTCAACGCG
GCTGGCGGGG TACACGGCAG GCGCGTGGAA ATCGTGGCCA TGGACGATGG CTACGACCCG
GACCGCACCG TGCGGAATGT CATCAGGCTC ATAGAGGAAG AGCGGGTTTT CGCGCTGTTC
GGTCTGGTGG GCACACCCAC GGTCACGCGG GTGCTGCCGC TGCTTGGCGG CCACCCGGAG
CGCACGGTGC CGCTGCTGTT CCCCTTCACC GGGGCGCGGC CCCTGTCCCT GCCGCGTCAC
GAGGGGCTGG TGTTTCGCCT GCGGGCCTCG TATGACGCCG AATTTTCCGA ACTGGTGGAC
CGCCTGCATG ACGCGGGGTG CTCCCGCATC GCCGTGTTCT ACCAGGCCGA CGCCTATGGC
CGTGAAGGCT GGGCCGACCT GCGTGATGCA CTGGCCCGCC GCCGCCTGCC CCTGGCGGCG
GAGGCCTCCT ACCCGCGTGG GTCGGGAAGC GACGCCGATT TCACCGAACA GGCGGGGCTG
ATCCTGCAAG GCATGCCCGA CGCCGTGGTC TGCGTGGGTA CCGACGCCAC GTGCGCGGCC
TTCATCCGGG ACCTGCGCGA CGTTCCGGCC GCACGGGGCG CCAAGCGGCA GGCGGGCCAG
CCTTCCCCCC AGTTCTCCGG CAAGGGCGGG CCCGCCATCC CCGTGGCCAT GCCGTCTTTC
GTGGACAGTC GCCAGTTGGT GGACCTGCTG GTAGCCATGG GGCGCTCGGT ACGGCGTGAC
TACACGCACG ATCTCGTGCT GACGGAAGTG GTGTCTCCAT GGACCGGCAA CCTGCCAGCC
GCCATTGACT ATCGCCGTGA TTTCGCTGAG ATGGCGGATG TCCCCGACGT GCTGGACATT
CCCGGCAACG ACGCGGCCCC GCCGTCGGCA CCGGGCGAGG TGAGCTTCGA GGGGTACCTG
GCCGCGCGGC TGCTGGTGCG GGCACTGGAA CGCATGGGGC CGCACCCGTC GCCCGCTGGA
CTTCACGAGG CCCTGGTCGG GCTTGACGGT TACGACCTGG GCGTTGGCCA GCCGTACCGC
TACACCCCAA CCGAACAGGG CCTGGGGCTG GTGCGCTTCG CCACCGTGCG CGGCGGCGTG
CCGGTGGACC TGCGCGACTT TTCGGAGTGG CGGCGATGA
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| Protein sequence | MCKAQAGLTY QQFCVAVTCT VLLLLAAWPD SAARAEREMA QGAFASGPTC GPTGNPIGPS
FTNPAHPAPS APAPDFQNAE AGTGLAIPAA VPAAVRATAS GGPSRIAATR TPGFPTGSLV
AQDSRAAGVP ATAAAPFAYT GETVAPADVP SGVPSGSNQP RSAAVSPADA KPSADSPAGG
ELAPGEPVRL GMSAPFSGPG VSLGREFHRG AASCLARVNA AGGVHGRRVE IVAMDDGYDP
DRTVRNVIRL IEEERVFALF GLVGTPTVTR VLPLLGGHPE RTVPLLFPFT GARPLSLPRH
EGLVFRLRAS YDAEFSELVD RLHDAGCSRI AVFYQADAYG REGWADLRDA LARRRLPLAA
EASYPRGSGS DADFTEQAGL ILQGMPDAVV CVGTDATCAA FIRDLRDVPA ARGAKRQAGQ
PSPQFSGKGG PAIPVAMPSF VDSRQLVDLL VAMGRSVRRD YTHDLVLTEV VSPWTGNLPA
AIDYRRDFAE MADVPDVLDI PGNDAAPPSA PGEVSFEGYL AARLLVRALE RMGPHPSPAG
LHEALVGLDG YDLGVGQPYR YTPTEQGLGL VRFATVRGGV PVDLRDFSEW RR
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