Gene DvMF_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0200 
Symbol 
ID7172080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp217942 
End bp219102 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content69% 
IMG OID643538698 
ProductRadical SAM domain protein 
Protein accessionYP_002434628 
Protein GI218885307 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0237698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGACG CACGACTCTG GAAACCGCTG CCACCACCCG GCGGCGCTGA TGCCGCAGGC 
ACCGCCGCAT CGCCGGATGC GGACGCGACG CGCGTGCAGT GTCGCCTGTG CAGCCATTAC
TGCATCATTG CGGGGGGCGG CACGGGCCGT TGCGGGGTGC GGGTGAATCG GCCCGACGTT
CCGGGACCAG ACGAATCGAA ACCGGGCGCG GCGGGGTCAA ATGCGCCGGA CCCCACTGCG
CCGGTCAAGG CCGCTCCGGT GGGCAGGCTG TTCACCCTGG TGGGCGACAA CGTGGCCGCC
GTGAACCTGG ACCCGGTGGA AAAGAAGCCG CTGTTCCACT TCATGCCGGG CACGCTCACC
TATTCCTTCG GCACCATGGG CTGCAACCTG GCGTGCAGCT TTTGCCAGAA CTGGTCGCTG
TCGCGCCCAC CGGCGGAAGA AGGCGTGGTG CGCGGCCAGC GCGTCACACC GGCCAAGCTG
GTGGCCGAGG CCAGGGCCAG CGGGGCGGCG TCGGTATCGT TCACCTATTC CGAGCCCACC
ATCTTTTTCG AACTGATGAC CGACACGGCG GATGCGGCCC GCGCCGCCGG GCTTGCCACC
ATCATGGTCT CCAACGGGTT CCAGTCGCCG GAGTGCCTGG CGGAACTGGA ACACCGCATC
GACGCGGCCA ACATCGATTT GAAGGCCTTC ACCGAGCATT TCTACGCAAC CCAGTGCGGC
GCGCGGCTGA AGCCGGTGCT GCACACCCTG CGCACCATCG CCCGCATGGG CTGGTGGCTG
GAGGTGACCA CCCTGCTCAT CCCCGGCCTG AACGACAATC CGGATGAGTT GCGCGACATG
GCCCGGTTCA TCCGCGACGA ACTGGGGCCG GACGTGCCGT GGCACCTTTC GCGCTTTCAC
CCGGCCTACC GCCTGACAGA CCGCCCCCCC ACCCCACCGG CCACGCTGGA ACGGGCCTGG
GAAATCGGAC GCGGGGAAGG GCTGCGTTTC GTCTACCTGG GCAACATGCC GGGCCACCCC
GCCGAATCCA CCCACTGTCC CGCCTGCGGC GCCCTGTTCG CCCTGCGCGA GGGCTTTCAC
ACCCACCTGC CCGCTTCGTC GCGGTGCGCC CGCTGCGGGG CCGTCGTGCC GGGGGTGGGC
TGGGATACCC CGGAGAACTG A
 
Protein sequence
MLDARLWKPL PPPGGADAAG TAASPDADAT RVQCRLCSHY CIIAGGGTGR CGVRVNRPDV 
PGPDESKPGA AGSNAPDPTA PVKAAPVGRL FTLVGDNVAA VNLDPVEKKP LFHFMPGTLT
YSFGTMGCNL ACSFCQNWSL SRPPAEEGVV RGQRVTPAKL VAEARASGAA SVSFTYSEPT
IFFELMTDTA DAARAAGLAT IMVSNGFQSP ECLAELEHRI DAANIDLKAF TEHFYATQCG
ARLKPVLHTL RTIARMGWWL EVTTLLIPGL NDNPDELRDM ARFIRDELGP DVPWHLSRFH
PAYRLTDRPP TPPATLERAW EIGRGEGLRF VYLGNMPGHP AESTHCPACG ALFALREGFH
THLPASSRCA RCGAVVPGVG WDTPEN