Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0161 |
Symbol | |
ID | 7172036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 174367 |
End bp | 176121 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643538655 |
Product | integral membrane protein |
Protein accession | YP_002434590 |
Protein GI | 218885269 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.0150458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCACA CAGACGTCGA TTCCGCCGCC CACAAGCATT CCCCACCGTG GAAGAAACAC CTGCGTTCGC TGGGCAAGGT TGCGGTGTTC GCCGTATTCT GCGGAGCGGT GTGGCTGCTG TACAACGAAG TCAGCAAATA CCATATCGAC GAAATCCGCG AGAGCATGCG CCAGATGCCC ATGACCAGCA TCGTGGCCTC CATTGTGCTG ATGGTGTTCA ACTATCTGGT GCTGGTGGGG TACGACGCGC TGGCGCTGCG CGCCATCAAC AAGCCGCTTT CCCTGACCCG CACCGCCCTT GTCTCGTTCG TGGGCTGCGT GACCAGCTAC AACTTCGGGG CGCTGCTGGG CGGCAGCTCG GTGCGCTACC GGTTCTATTC GGCCTGGGGC TTTTCGGTGG TGGACGTGGT GCGCCTGGTG GTCATGCTGG CCATCACCTT CTGGGTGGGC GCGCTGGGCG TGGCTGGTGC CGTGTTCATC ATCCAGCCGC TGCCGGTGCC CGAATCGCTC GACATTCCCG TGCGCGACGT GCGCCTGCTG GGCGTGGTGC TGCTGGCGCT GACCATCGGC TACCACATCC TGACGCTGGT GGCGAAGCAC CCCATCAAGG TCATGGGCAA GGAATTCGCG CTGCCGCCCT TCCGGCTGGC CATCATGCAG ACCCTGGTGG CCGGGCTGGA TCTGGTGGTG GCGGCGGGCT GCCTGTTCGT GCTGATGCCC GCCGACCTCG GGCTGGACTT CATCCAGTTT CTTTCCGTGT ACCTGATGGC CGTCGTGGCC GTGGTGCTCA GCCACGTGCC CGGCGGCGCG GGCGTGTTCG AACTGGTCAT CCTCAGCCTG TCGCACACCC ACTCTCCCCA GACGGTCATT GCCGCGCTGA TCTGCTTCCG GTTCATCTAC TACCTGCTGC CGCTGCTGTT CGCCGCCGTG CTGCTGGGCG GACACGAACT GCACCTGCGC CGCCACGAGG CGGAACGGAT GCTGGACGAG GCGGGCCGCT GGACCGATGC CCTGTCGCAT ACCCTGATGG CCTACCTGGC CTTTGCCGCA GGGCTGATCC TGCTGTTCTC CAGCGCCATC CCCCTTGCGG CGGACAGCCG CGCCGTTCTG GCGGCCAGCG TGCCGCTGTG GGCCATGGAA TCCGCCCACT TCATGGGCGG CGTGGCAGGG GTGGGGCTGC TGCTGCTTTC GCGCGGGCTG CAACGCCGCC TGGCTTCGGC CTGGCGGCTG GTGACTGCGC TGGTGGTGCT GGGCATCGCC AGTTGCGTGC TGAAGGGGCT GGACTGGCAG GAAGCCATCC TGCTGGCGCT GGTGCTGGCC TCGCTGTGCG TGACCCGACG GCGCTTCTTC CGCCGCACCT CGCTGCTGCG CGAACGATTC ACCGTGCGCT GGATGGTGGC GGTGCTGCTG GTGGTGGGCT GTGCCCTGCT GCTGGGGCTG TTCGTGCACG GTCGTGTGCC CTACACCGCC GACCTGTGGT GGACCTTCGC GGCGGAAAAT GACGCCGCCC GCCTGCTGCG TGCCTTTGGC GGCATAGCCG TGGTGCTGGC GGTGTTCATG CTGCGGCGCA TGGCCTTTCC GCTGCACGGA CGCCTTGGGG AATTCACCGC GGCGCGGCGC GAACGGTTCC GGCGCATCTA CCGCGCGGCC CAGCGCATCC GCGAAAACGC CCTGCGTCGC AAGAAGCCGG AGCATGCCGA CCATAACGGC CATAACGGCC AGACCGGTCA GACCGGCAAG CCTGGAAACG ACTAG
|
Protein sequence | MKHTDVDSAA HKHSPPWKKH LRSLGKVAVF AVFCGAVWLL YNEVSKYHID EIRESMRQMP MTSIVASIVL MVFNYLVLVG YDALALRAIN KPLSLTRTAL VSFVGCVTSY NFGALLGGSS VRYRFYSAWG FSVVDVVRLV VMLAITFWVG ALGVAGAVFI IQPLPVPESL DIPVRDVRLL GVVLLALTIG YHILTLVAKH PIKVMGKEFA LPPFRLAIMQ TLVAGLDLVV AAGCLFVLMP ADLGLDFIQF LSVYLMAVVA VVLSHVPGGA GVFELVILSL SHTHSPQTVI AALICFRFIY YLLPLLFAAV LLGGHELHLR RHEAERMLDE AGRWTDALSH TLMAYLAFAA GLILLFSSAI PLAADSRAVL AASVPLWAME SAHFMGGVAG VGLLLLSRGL QRRLASAWRL VTALVVLGIA SCVLKGLDWQ EAILLALVLA SLCVTRRRFF RRTSLLRERF TVRWMVAVLL VVGCALLLGL FVHGRVPYTA DLWWTFAAEN DAARLLRAFG GIAVVLAVFM LRRMAFPLHG RLGEFTAARR ERFRRIYRAA QRIRENALRR KKPEHADHNG HNGQTGQTGK PGND
|
| |