| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0091 |
|---|
| Symbol | rplE |
|---|
| ID | 7171965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 106583 |
|---|
| End bp | 107122 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643538584 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_002434520 |
|---|
| Protein GI | 218885199 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.0564705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC TTGAACAGAT ATACCGCGAG AAAGTGGTTC CGGTATTGCA GAAGGAGTTT
AACTACACTT CTTCGATGCA GGTTCCCGGG ATTGAAAAAG TCTCTCTGAA TATCGGCCTC
GGCGCCGCGA GCCAGAACAA CAAGTTGATG GAAGAAGCCA TCAAGGAGTT GACCGCCATC
GCCGGGCAGA AGGCCGTCGT GACCCGCGCC AAGAAGTCCA TCGCGTCGTT CAAGCTGCGC
GAAGGCATGC CCATCGGCTG CCGCGTGACG CTGCGCAAGG AACGCATGTG GGACTTTCTG
GACAAGCTGA TGAACTTCGC GCTGCCCCGC GTGCGCGACT TCAGAGGGAT TCCGGACCGT
GGCTTCGATG GCCGGGGCAA TTTTACCCTG GGCATCAAGG AACACACCAT TTTCCCCGAG
CTGGAAGTGG ATCGCGTTGA CAACCCCAAG GGGATGAACA TCACGATCGT TACCACTGCC
CAGACGGACA AGGAAGGCAA GCTGCTGCTC GACCAGCTCG GCATGCCTTT CAAGAAGTAA
|
|---|
| Protein sequence | MTRLEQIYRE KVVPVLQKEF NYTSSMQVPG IEKVSLNIGL GAASQNNKLM EEAIKELTAI
AGQKAVVTRA KKSIASFKLR EGMPIGCRVT LRKERMWDFL DKLMNFALPR VRDFRGIPDR
GFDGRGNFTL GIKEHTIFPE LEVDRVDNPK GMNITIVTTA QTDKEGKLLL DQLGMPFKK
|
|---|
| |