Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0080 |
Symbol | rplD |
ID | 7171954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 101945 |
End bp | 102565 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643538573 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_002434509 |
Protein GI | 218885188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.186923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGG TGAAAGTATA CGATCAGAAC AAGAAGGAAG CCGGCGAACT GACGCTCGCT CCCGAGGTGT TCGAGGTCGA GGTGAAGCCT GAGATTCTCA ATCTCGTGGT CCGTGCGCAC CGCGCCGGGC TGCGCTCCGG CACCCATGCC ACCAAGACCC GCGCCTTCGT CTCCGGCGGC GGTGCAAAGC CCTGGCGCCA GAAAGGCACC GGCCGCGCCC GTTCCGGTTC GAACCGCTCG CCCATCTGGC GAGGCGGGGC CGTCATTTTC GGCCCCCAGC CCCGCGAGTA CGGCTTCAAG GTGAACAAGA AGGTCCGTCA GCTGGCCCTG AAAATGGCGC TCAGCTCGCG GCTTGCCGGC GAGAACCTGA TGGTGGTCAA GGGCATCGAA CTGCCCGAGA TCAAGACCAA GCTGTTCGCC AAGGTGGCCG GTGCCCTGGG CCTCGAAAAG GCCCTGGTCA TTACCGCCGA AGCGGATACC ACCCTCGCCC TTTCGGCCCG CAACATTCCC GGCATTACCC TGATCACCGC CGACCAGCTC AGCGTCTACG AGATTCTGAA GCACCCGAAG CTGGTGATGT TCGAGGGCGC CGTCGAATCC GTCCAGGCCA GGCTGAAGTA G
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Protein sequence | MAVVKVYDQN KKEAGELTLA PEVFEVEVKP EILNLVVRAH RAGLRSGTHA TKTRAFVSGG GAKPWRQKGT GRARSGSNRS PIWRGGAVIF GPQPREYGFK VNKKVRQLAL KMALSSRLAG ENLMVVKGIE LPEIKTKLFA KVAGALGLEK ALVITAEADT TLALSARNIP GITLITADQL SVYEILKHPK LVMFEGAVES VQARLK
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